Tableau information
Concept source: d1yp6a1 amino acid (a.a.) range (PRO93)(GLY142)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO93) (ASP98) E1
(ASN99) (ASP110) E2
(PHE114) (ARG122) E3
(SER128) (GLY142) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -144.8° E2
E3 11.3° 155.2° E3
H4 -166.4° -31.6° 163.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2dtge5 : (SER399) (SER446) [view usage] : c.10.2.5 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |L domain |Insulin receptor |Human (Homo sapiens) [TaxId: 9606]
d1jv4a_ : (PRO93) (GLY142) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Major urinary protein/alpha-2u-globulin |Mouse (Mus musculus) [TaxId: 10090]
d1sy0a_ : (MET110) (ALA156) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Nitrophorin 4 |Rhodnius prolixus [TaxId: 13249]
d1qftb_ : (ALA113) (ALA156) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Histamine binding protein |Brown ear tick (Rhipicephalus appendiculatus) [TaxId: 34631]
d1w2be_ : (GLY27) (GLY79) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Prokaryotic (50S subunit) |Haloarcula marismortui [TaxId: 2238]
d2acfc_ : (LEU253) (ASP302) [view usage] : c.50.1.2 |Macro domain-like |Macro domain-like |Macro domain |automated matches |Sars coronavirus tor2 [TaxId: 227984]
d1qfta_ : (ALA113) (GLU154) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Histamine binding protein |Brown ear tick (Rhipicephalus appendiculatus) [TaxId: 34631]
d1guia_ : (PHE25) (GLN64) [view usage] : b.18.1.14 |Galactose-binding domain-like |Galactose-binding domain-like |CBM4/9 |Carbohydrate binding module from laminarinase 16A |Thermotoga maritima [TaxId: 2336]
d3g7xa_ : (ALA113) (GLU154) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |automated matches |Brown ear tick (Rhipicephalus appendiculatus) [TaxId: 34631]
d1yp6a1 : (PRO93) (GLY142) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Major urinary protein/alpha-2u-globulin |Mouse (Mus musculus) [TaxId: 10090]
d1w5da1 : (ALA410) (GLN462) [view usage] : e.3.1.3 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |Dac-like |Penicillin-binding protein DacC |Bacillus subtilis [TaxId: 1423]
d3g7xb_ : (ALA113) (ALA156) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |automated matches |Brown ear tick (Rhipicephalus appendiculatus) [TaxId: 34631]
d1u7hb_ : (VAL46) (ASN81) [view usage] : c.2.1.13 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Ornithine cyclodeaminase-like |Ornithine cyclodeaminase |Pseudomonas putida [TaxId: 303]
d2acfb_ : (LEU253) (ASP302) [view usage] : c.50.1.2 |Macro domain-like |Macro domain-like |Macro domain |automated matches |Sars coronavirus tor2 [TaxId: 227984]
d1wdka4 : (ILE2) (ASP50) [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Fatty oxidation complex alpha subunit, N-terminal domain |Pseudomonas fragi [TaxId: 296]
d1u17b_ : (MET111) (ALA157) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Nitrophorin 1 |Rhodnius prolixus [TaxId: 13249]
d1u17a1 : (MET111) (ALA157) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Nitrophorin 1 |Rhodnius prolixus [TaxId: 13249]
d1mupa_ : (PRO97) (GLY146) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Major urinary protein/alpha-2u-globulin |Mouse (Mus musculus) [TaxId: 10090]
d1euoa_ : (LEU109) (ALA155) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Nitrophorin 2 (prolixin-s) |Rhodnius prolixus [TaxId: 13249]
d1yjxb_ : (LEU208) (MET243) [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, c.10, c.2, i.1, c.14, b.60, b.18, c.60, c.50