Tableau information
Concept source: d2aeja2 amino acid (a.a.) range (GLY290)(ILE334)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY290) (GLY299) E1
(ASP300) (ASP305) E2
(ASP316) (ILE321) E3
(LYS323) (ILE334) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 144.3° E2
E3 145.2° -55.0° E3
H4 -50.6° 109.5° 163.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1bp1a1 : (PHE97) (ILE162) [view usage] : d.83.1.1 |Aha1/BPI domain-like |Bactericidal permeability-increasing protein, BPI |Bactericidal permeability-increasing protein, BPI |Bactericidal permeability-increasing protein, BPI |Human (Homo sapiens) [TaxId: 9606]
d1vcta2 : (GLY149) (GLY195) [view usage] : d.286.1.1 |TrkA C-terminal domain-like |TrkA C-terminal domain-like |TrkA C-terminal domain-like |Hypothetical protein PH0236, C-terminal domain |Pyrococcus horikoshii [TaxId: 53953]
d1dtxa_ : (PRO21) (GLY59) [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |alpha-Dendrotoxin |Green mamba (Dendroaspis angusticeps) [TaxId: 8618]
d2aema2 : (GLY290) (SER335) [view usage] : d.286.1.1 |TrkA C-terminal domain-like |TrkA C-terminal domain-like |TrkA C-terminal domain-like |Potassium channel-related protein MthK, C-terminal domain |Methanothermobacter thermautotrophicus [TaxId: 145262]
d1xkna_ : (GLY99) (ALA143) [view usage] : d.126.1.6 |Pentein, beta/alpha-propeller |Pentein |Porphyromonas-type peptidylarginine deiminase |Putative peptidyl-arginine deiminase |Chlorobium tepidum [TaxId: 1097]
d1y7ba2 : (VAL38) (TRP74) [view usage] : b.67.2.1 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |alpha-L-arabinanase-like |Beta-D-xylosidase N-terminal domain |Clostridium acetobutylicum [TaxId: 1488]
d1mk2a_ : (ILE371) (MET413) [view usage] : b.26.1.1 |SMAD/FHA domain |SMAD/FHA domain |SMAD domain |Smad3 MH2 domain |Human (Homo sapiens) [TaxId: 9606]
d1cd9d1 : (GLN79) (VAL107) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Granulocyte colony-stimulating factor (GC-SF) receptor |Mouse (Mus musculus) [TaxId: 10090]
d3n84f_ : (ASP94) (ARG136) [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Growth factor receptor-bound protein 2 (GRB2) |Human (Homo sapiens) [TaxId: 9606]
d1af0a2 : (GLN133) (HIS163) [view usage] : d.92.1.6 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Serralysin-like metalloprotease, catalytic (N-terminal) domain |Metalloprotease |Serratia marcescens [TaxId: 615]
d2aefb2 : (GLY290) (ILE334) [view usage] : d.286.1.1 |TrkA C-terminal domain-like |TrkA C-terminal domain-like |TrkA C-terminal domain-like |Potassium channel-related protein MthK, C-terminal domain |Methanothermobacter thermautotrophicus [TaxId: 145262]
d1sxwa_ : (SER115) (ALA156) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Nitrophorin 4 |Rhodnius prolixus [TaxId: 13249]
d1gm5a2 : (VAL221) (ARG253) [view usage] : b.40.4.9 |OB-fold |Nucleic acid-binding proteins |RecG "wedge" domain |RecG "wedge" domain |Thermotoga maritima [TaxId: 2336]
d1bg1a2 : (GLU435) (THR484) [view usage] : b.2.5.5 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |STAT DNA-binding domain |STAT3b |Mouse (Mus musculus) [TaxId: 10090]
d1cwva4 : (PRO796) (GLN837) [view usage] : b.1.14.1 |Immunoglobulin-like beta-sandwich |Invasin/intimin cell-adhesion fragments |Invasin/intimin cell-adhesion fragments |Invasin |Yersinia pseudotuberculosis [TaxId: 633]
d2wgvb_ : (GLY224) (GLY262) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Class D beta-lactamase |Pseudomonas aeruginosa, OXA-10 [TaxId: 287]
d2bkpa2 : (GLY149) (GLY195) [view usage] : d.286.1.1 |TrkA C-terminal domain-like |TrkA C-terminal domain-like |TrkA C-terminal domain-like |Hypothetical protein PH0236, C-terminal domain |Pyrococcus horikoshii [TaxId: 53953]
d2inwb_ : (PRO28) (GLN64) [view usage] : d.110.8.1 |Profilin-like |YeeU-like |YagB/YeeU/YfjZ-like |Hypothetical protein YeeU |Shigella flexneri [TaxId: 623]
d1bika2 : (ALA93) (GLY133) [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |Bikunin from inter-alpha-inhibitor complex |Human (Homo sapiens) [TaxId: 9606]
d1qpva_ : (LEU63) (LYS105) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |Cofilin (actin depolymerizing factor, ADF) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3n84e_ : (ASP94) (ARG136) [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Growth factor receptor-bound protein 2 (GRB2) |Human (Homo sapiens) [TaxId: 9606]
d2d9qb3 : (GLN174) (VAL202) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Granulocyte colony-stimulating factor (GC-SF) receptor |Human (Homo sapiens) [TaxId: 9606]
d2aeja2 : (GLY290) (ILE334) [view usage] : d.286.1.1 |TrkA C-terminal domain-like |TrkA C-terminal domain-like |TrkA C-terminal domain-like |Potassium channel-related protein MthK, C-terminal domain |Methanothermobacter thermautotrophicus [TaxId: 145262]
d2inwa1 : (PRO28) (GLN64) [view usage] : d.110.8.1 |Profilin-like |YeeU-like |YagB/YeeU/YfjZ-like |Hypothetical protein YeeU |Shigella flexneri [TaxId: 623]
d1wnja_ : (VAL59) (GLU106) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |Coactosin-like protein Cotl1 (Clp) |Human (Homo sapiens) [TaxId: 9606]
d1lnqa4 : (GLY290) (SER335) [view usage] : d.286.1.1 |TrkA C-terminal domain-like |TrkA C-terminal domain-like |TrkA C-terminal domain-like |Potassium channel-related protein MthK, C-terminal domain |Methanothermobacter thermautotrophicus [TaxId: 145262]
d4mpof_ : (LYS5) (GLU63) [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Chlamydia trachomatis [TaxId: 471472]
d3pena1 : (LEU49) (MET111) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d1rpla2 : (ILE298) (ILE323) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase beta, catalytic (31 kD) fragment |Norway rat (Rattus norvegicus) [TaxId: 10116]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, b.67, d.92, b.40, c.37, b.60, b.2, b.1, d.126, d.110, b.26, d.109, d.93, d.218, d.113, d.83, g.8, d.286