Protein Concepts Dictionary

Tableau information

Concept source:  d1hv5a_  amino acid (a.a.) range (ASP158)(GLY226)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: EEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP158)  (PHE163) E1
	  (LEU181)  (PHE186) E2
	  (GLY193)  (PHE197) E3
	  (ASP212)  (GLY226) H4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                          
E2      155.0°   E2                   
E3      -12.4°  166.5°   E3            
H4      145.5°  -22.2°  156.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3urra_ :    (GLY62)  (ASP126)   [view usage] : d.112.1.0 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
 d3hoaa_ :   (GLY238)  (LEU287)   [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Thermus thermophilus [TaxId: 262724]
 d1g12a_ :    (TYR71)  (PHE122)   [view usage] : d.92.1.12 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Fungal zinc peptidase |Fungal zinc peptidase |Grifola frondosa [TaxId: 5627]
 d1a6ja_ :    (ILE69)  (ALA132)   [view usage] : d.112.1.1 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |IIA domain of mannitol-specific and ntr phosphotransferase EII |Nitrogen regulatory bacterial protein IIa-ntr |Escherichia coli [TaxId: 562]
 d2rk8a1 :   (LYS191)  (GLU258)   [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3hq2b_ :   (GLY227)  (ILE276)   [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d1hynp_ :   (ALA226)  (GLU291)   [view usage] : d.112.1.2 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |Anion transport protein, cytoplasmic domain |Erythrocite membrane Band 3 |Human (Homo sapiens) [TaxId: 9606]
 d4fyqa2 :   (LYS340)  (VAL399)   [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1wgza_ :   (GLY238)  (LEU287)   [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d1umsa_ :   (ASP141)  (GLY208)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Stromelysin-1 (MMP-3) |Human (Homo sapiens), fibroblast [TaxId: 9606]
 d1ge6a_ :    (TYR71)  (PHE122)   [view usage] : d.92.1.12 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Fungal zinc peptidase |Fungal zinc peptidase |Grifola frondosa [TaxId: 5627]
 d2mlra_ :   (ASP158)  (LEU224)   [view usage] : d.92.1.11 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Matrix metalloproteases, catalytic domain |Macrophage elastase (MMP-12) |Human (Homo sapiens) [TaxId: 9606]
 d2gtqa2 :   (PHE246)  (THR305)   [view usage] : d.92.1.13 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Zn aminopeptidase catalytic domain |Aminopeptidase N (APN) catalytic domain |Neisseria meningitidis [TaxId: 122586]
 d2fafa1 :   (ARG210)  (GLN277)   [view usage] : c.109.1.0 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
 d1hynr_ :   (ALA226)  (GLU291)   [view usage] : d.112.1.2 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |Anion transport protein, cytoplasmic domain |Erythrocite membrane Band 3 |Human (Homo sapiens) [TaxId: 9606]
 d2a0ja_ :    (GLY62)  (PHE124)   [view usage] : d.112.1.0 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |automated matches |automated matches |Neisseria meningitidis [TaxId: 122586]
 d1hynq_ :   (ALA226)  (GLU291)   [view usage] : d.112.1.2 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |Anion transport protein, cytoplasmic domain |Erythrocite membrane Band 3 |Human (Homo sapiens) [TaxId: 9606]
 d1khba2 :   (LYS191)  (GLU258)   [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) |Human (Homo sapiens) [TaxId: 9606]
 d3hq2a_ :   (GLY227)  (ILE276)   [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d3dt2a1 :   (LYS191)  (GLU258)   [view usage] : c.109.1.1 |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |PEP carboxykinase N-terminal domain |Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4gqxa_ :    (VAL63)  (ASP126)   [view usage] : d.112.1.0 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
 d1a6jb_ :    (ILE69)  (ALA132)   [view usage] : d.112.1.1 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |IIA domain of mannitol-specific and ntr phosphotransferase EII |Nitrogen regulatory bacterial protein IIa-ntr |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.92,   c.109,   d.112