Tableau information
Concept source: d1nr4g_ amino acid (a.a.) range (LYS25)(LEU68)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS25) (GLN29) E1
(ASP37) (THR43) E2
(GLY46) (CYS50) E3
(LYS56) (LEU68) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 166.6° E2
E3 -32.8° 159.1° E3
H4 -119.9° 55.2° -139.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1k5ua_ : (LYS10) (GLN43) [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
d2m38a_ : (CYS94) (GLN146) [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nr4a_ : (LYS25) (SER67) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Thymus and activation-regulated chemokine, TRAC |Human (Homo sapiens) [TaxId: 9606]
d4ra8b_ : (ALA26) (SER69) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4mhec_ : (VAL26) (LEU68) [view usage] : d.9.1.0 |IL8-like |Interleukin 8-like chemokines |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1f9ra_ : (THR25) (SER70) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Platelet factor 4, PF4 |Human (Homo sapiens) [TaxId: 9606]
d1axmb_ : (PRO11) (GLN43) [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
d1pqza2 : (LYS89) (ALA142) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Immunomodulatory protein m144, alpha-1 and alpha-2 domains |Murine cytomegalovirus [TaxId: 10366]
d1f9rb_ : (THR125) (SER170) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Platelet factor 4, PF4 |Human (Homo sapiens) [TaxId: 9606]
d1yhia_ : (GLU90) (HIS139) [view usage] : d.22.1.1 |GFP-like |GFP-like |Fluorescent proteins |automated matches |Jellyfish (Aequorea victoria) [TaxId: 6100]
d1f9pa_ : (GLN40) (ALA84) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Platelet basic protein, PBP |Human (Homo sapiens) [TaxId: 9606]
d2awja_ : (VAL93) (HIS139) [view usage] : d.22.1.1 |GFP-like |GFP-like |Fluorescent proteins |Green fluorescent protein, GFP |Jellyfish (Aequorea victoria) [TaxId: 6100]
d2d6kb_ : (PHE98) (THR132) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3ojva_ : (LYS25) (GLN58) [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
d4k00b_ : (ARG74) (ASP136) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Synechocystis sp. [TaxId: 1111708]
d1yhgb_ : (GLU390) (HIS439) [view usage] : d.22.1.1 |GFP-like |GFP-like |Fluorescent proteins |automated matches |Jellyfish (Aequorea victoria) [TaxId: 6100]
d2x6gm_ : (ALA26) (GLU67) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Macrophage inflammatory protein, MIP |Human (Homo sapiens), 1-alpha [TaxId: 9606]
d2x6gi_ : (ALA26) (GLU67) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Macrophage inflammatory protein, MIP |Human (Homo sapiens), 1-alpha [TaxId: 9606]
d3n52a_ : (GLN24) (ASN68) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Macrophage inflammatory protein-2 |Mouse (Mus musculus) [TaxId: 10090]
d1plfa_ : (SER41) (SER85) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Platelet factor 4, PF4 |Cow (Bos taurus) [TaxId: 9913]
d1nr4g_ : (LYS25) (LEU68) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Thymus and activation-regulated chemokine, TRAC |Human (Homo sapiens) [TaxId: 9606]
d1nzka_ : (LYS10) (GLN43) [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
d2x6gb_ : (ALA26) (SER69) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Macrophage inflammatory protein, MIP |Human (Homo sapiens), 1-alpha [TaxId: 9606]
d1tvxb_ : (SER41) (GLY85) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Platelet basic protein, PBP |Human (Homo sapiens) [TaxId: 9606]
d4k00a_ : (ARG74) (PRO138) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Synechocystis sp. [TaxId: 1111708]
d1f9sb_ : (SER126) (SER170) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Platelet factor 4, PF4 |Human (Homo sapiens) [TaxId: 9606]
d1icwa_ : (LYS23) (ASN71) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Interleukin-8, IL-8 |Human (Homo sapiens) [TaxId: 9606]
d2o5ub_ : (ILE82) (GLN143) [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |Hypothetical thioesterase PA5185 |Pseudomonas aeruginosa [TaxId: 287]
d1yhha_ : (GLU90) (HIS139) [view usage] : d.22.1.1 |GFP-like |GFP-like |Fluorescent proteins |automated matches |Jellyfish (Aequorea victoria) [TaxId: 6100]
d1jk6a_ : (LYS18) (ASN48) [view usage] : b.9.1.1 |Neurophysin II |Neurophysin II |Neurophysin II |Neurophysin II |Cow (Bos taurus) [TaxId: 9913]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.29, b.42, d.38, d.19, b.55, d.9, d.22, b.9