Tableau information
Concept source: d4tqoa_ amino acid (a.a.) range (PRO351)(VAL385)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO351) (ASP357) E1
(VAL362) (ASN366) E2
(ASN374) (ASP379) E3
(ASP379) (VAL385) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 155.8° E2
E3 -31.4° 166.8° E3
H4 80.3° -76.9° 111.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1shwb_ : (ARG293) (ASN337) [view usage] : b.18.1.4 |Galactose-binding domain-like |Galactose-binding domain-like |Ephrin receptor ligand binding domain |Ligand-binding domain of the ephb2 receptor tyrosine kinase |Mouse (Mus musculus) [TaxId: 10090]
d3r0kb1 : (VAL2) (GLY58) [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Francisella philomiragia [TaxId: 484022]
d2ahna_ : (GLY100) (CYS193) [view usage] : b.25.1.0 |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |automated matches |automated matches |Prunus avium [TaxId: 42229]
d1emda2 : (GLY247) (LYS312) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Escherichia coli [TaxId: 562]
d2d04b_ : (ALA76) (ARG111) [view usage] : b.78.1.0 |beta-Prism II |alpha-D-mannose-specific plant lectins |automated matches |automated matches |Curculigo latifolia [TaxId: 4676]
d1uw5d_ : (GLY79) (LYS127) [view usage] : d.129.3.4 |TBP-like |Bet v1-like |Phoshatidylinositol transfer protein, PITP |Phoshatidylinositol transfer protein, PITP |Human (Homo sapiens) [TaxId: 9606]
d1ezve1 : (MET91) (ASN130) [view usage] : b.33.1.1 |ISP domain |ISP domain |Rieske iron-sulfur protein (ISP) |ISP subunit of the mitochondrial cytochrome bc1-complex, water-soluble domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1kita1 : (GLY53) (SER91) [view usage] : b.29.1.8 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Vibrio cholerae sialidase, N-terminal and insertion domains |Vibrio cholerae sialidase, N-terminal and insertion domains |Vibrio cholerae [TaxId: 666]
d4o0mb1 : (ASP203) (ARG253) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d1g8ta_ : (SER140) (ARG204) [view usage] : d.4.1.2 |His-Me finger endonucleases |His-Me finger endonucleases |DNA/RNA non-specific endonuclease |Sm endonuclease |Serratia marcescens [TaxId: 615]
d3ml1a1 : (LYS11) (LYS50) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |automated matches |Ralstonia eutropha [TaxId: 381666]
d2dava1 : (ILE11) (ALA56) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Myosin-binding protein C, slow-type |Human (Homo sapiens) [TaxId: 9606]
d4pz0a_ : (GLY298) (LYS344) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |automated matches |Bacillus anthracis [TaxId: 198094]
d1o0va1 : (PRO231) (THR281) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain epsilon constant domain 2, CH2-epsilon |Human (Homo sapiens) [TaxId: 9606]
d2hgca1 : (GLY48) (GLU75) [view usage] : a.4.5.77 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |YjcQ-like |Uncharacterized protein YjcQ |Bacillus subtilis [TaxId: 1423]
d1mlda2 : (GLY247) (MET313) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Pig (Sus scrofa) [TaxId: 9823]
d1feud_ : (ILE137) (ALA189) [view usage] : b.53.1.1 |Ribosomal protein L25-like |Ribosomal protein L25-like |Ribosomal protein L25-like |Ribosomal protein TL5 (general stress protein CTC) |Thermus thermophilus [TaxId: 274]
d1ib6a2 : (GLY247) (GLN307) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Escherichia coli [TaxId: 562]
d1uw5a_ : (GLY79) (LYS127) [view usage] : d.129.3.4 |TBP-like |Bet v1-like |Phoshatidylinositol transfer protein, PITP |Phoshatidylinositol transfer protein, PITP |Human (Homo sapiens) [TaxId: 9606]
d3hhpb2 : (GLY247) (ASN311) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4e3ya_ : (SER1140) (ARG1204) [view usage] : d.4.1.2 |His-Me finger endonucleases |His-Me finger endonucleases |DNA/RNA non-specific endonuclease |Sm endonuclease |Serratia marcescens [TaxId: 615]
d1o0vb3 : (GLU444) (SER491) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain epsilon constant domain 4, CH4-epsilon |Human (Homo sapiens) [TaxId: 9606]
d1rmja_ : (LEU25) (GLY70) [view usage] : g.28.1.1 |Thyroglobulin type-1 domain |Thyroglobulin type-1 domain |Thyroglobulin type-1 domain |Insulin-like growth factor binding protein 6 |Human (Homo sapiens) [TaxId: 9606]
d1vb5a_ : (LEU234) (ARG260) [view usage] : c.124.1.5 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |IF2B-like |Putative eIF-2B subunit 2-like protein PH0440 |Pyrococcus horikoshii [TaxId: 53953]
d2d54a2 : (GLY120) (ARG167) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Thermus thermophilus [TaxId: 274]
d3q45a1 : (MET1) (GLY56) [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Cytophaga hutchinsonii [TaxId: 269798]
d1dt3a_ : (ASP48) (ASN92) [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |Triacylglycerol lipase |Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
d4bndb_ : (ASN64) (GLY111) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Lactococcus lactis [TaxId: 416870]
d2z3ff1 : (ILE3) (ASP54) [view usage] : b.1.22.1 |Immunoglobulin-like beta-sandwich |ASF1-like |ASF1-like |Anti-silencing protein 1, ASF1 |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d2dfda2 : (GLY253) (LEU319) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3k5ra1 : (GLY1) (GLN44) [view usage] : b.1.6.0 |Immunoglobulin-like beta-sandwich |Cadherin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1ixca2 : (ARG147) (GLY178) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |LysR-type regulatory protein CbnR |Ralstonia eutropha [TaxId: 106590]
d1qaea_ : (SER140) (ARG204) [view usage] : d.4.1.2 |His-Me finger endonucleases |His-Me finger endonucleases |DNA/RNA non-specific endonuclease |Sm endonuclease |Serratia marcescens [TaxId: 615]
d1ql0a_ : (SER140) (ARG204) [view usage] : d.4.1.2 |His-Me finger endonucleases |His-Me finger endonucleases |DNA/RNA non-specific endonuclease |Sm endonuclease |Serratia marcescens [TaxId: 615]
d1a6za1 : (VAL188) (GLU230) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Hemochromatosis protein Hfe, alpha-3 domain |Human (Homo sapiens) [TaxId: 9606]
d3o5aa1 : (LYS11) (LYS50) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |automated matches |Ralstonia eutropha [TaxId: 381666]
d4o98b_ : (GLY217) (PRO259) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas oleovorans [TaxId: 301]
d1f1ha2 : (LEU332) (LYS385) [view usage] : d.128.1.1 |Glutamine synthetase/guanido kinase |Glutamine synthetase/guanido kinase |Glutamine synthetase catalytic domain |Glutamine synthetase, C-terminal domain |Salmonella typhimurium [TaxId: 90371]
d1jhsa_ : (GLY50) (GLY116) [view usage] : d.107.1.1 |Mog1p/PsbP-like |Mog1p/PsbP-like |Ran-binding protein mog1p |Ran-binding protein mog1p |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.70, c.69, c.81, c.94, c.108, b.29, c.26, d.157, c.124, c.93, d.129, c.37, b.18, b.1, b.25, a.4, d.162, d.128, d.54, d.4,
b.33, g.28, d.107, b.78, b.53