Tableau information
Concept source: d2rftb_ amino acid (a.a.) range (SER129)(GLY155)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER129) (GLY134) E1
(GLY136) (LYS141) E2
(HIS142) (GLN146) E3
(GLN146) (GLY155) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 154.0° E2
E3 -67.4° -121.4° E3
H4 -73.8° 128.7° -85.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1lwsa3 : (ALA368) (CYS398) [view usage] : d.95.2.2 |Homing endonuclease-like |Homing endonucleases |Intein endonuclease |VMA1-derived endonuclease (VDE) PI-SceI |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1zmya1 : (ASN77) (GLY116) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Camelid IG heavy chain variable domain, VHh |Camel (Camelus dromedarius) [TaxId: 9838]
d4mc7a_ : (PRO77) (GLY101) [view usage] : b.68.1.0 |6-bladed beta-propeller |Sialidases |automated matches |automated matches |Influenza A virus [TaxId: 11320]
d4m44d_ : (SER129) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza b virus [TaxId: 416659]
d1g3ga_ : (ASN119) (LYS159) [view usage] : b.26.1.2 |SMAD/FHA domain |SMAD/FHA domain |FHA domain |Phosphotyrosine binding domain of Rad53 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4m44b_ : (SER129) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza b virus [TaxId: 416659]
d2i6ba_ : (ILE8) (TYR31) [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Adenosine kinase |Human (Homo sapiens) [TaxId: 9606]
d1k8ga2 : (SER275) (ALA311) [view usage] : b.40.4.3 |OB-fold |Nucleic acid-binding proteins |Single strand DNA-binding domain, SSB |Telomere end binding protein alpha subunit |Oxytricha nova [TaxId: 200597]
d1j3pa_ : (PHE7) (LYS32) [view usage] : b.82.1.7 |Double-stranded beta-helix |RmlC-like cupins |Glucose-6-phosphate isomerase, GPI |Glucose-6-phosphate isomerase, GPI |Thermococcus litoralis [TaxId: 2265]
d1qxja_ : (PHE6) (GLU31) [view usage] : b.82.1.7 |Double-stranded beta-helix |RmlC-like cupins |Glucose-6-phosphate isomerase, GPI |Glucose-6-phosphate isomerase, GPI |Pyrococcus furiosus [TaxId: 2261]
d2cnaa_ : (ALA196) (GLY227) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Concanavalin A |Jack bean (Canavalia ensiformis) [TaxId: 3823]
d1txoa_ : (GLU170) (VAL197) [view usage] : d.219.1.1 |PP2C-like |PP2C-like |PP2C-like |putative serine/threonine phosphatase pstp/ppp |Mycobacterium tuberculosis [TaxId: 1773]
d3sxwa_ : (PHE8) (GLU33) [view usage] : b.82.1.7 |Double-stranded beta-helix |RmlC-like cupins |Glucose-6-phosphate isomerase, GPI |automated matches |Pyrococcus furiosus [TaxId: 186497]
d1za2b1 : (ARG41) (GLN73) [view usage] : d.58.2.1 |Ferredoxin-like |Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain |Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain |Aspartate carbamoyltransferase |Escherichia coli [TaxId: 562]
d4ahca1 : (LEU3) (ILE54) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Pyrococcus furiosus [TaxId: 2261]
d4nrjf_ : (SER129) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza b virus [TaxId: 107412]
d1rl3b2 : (SER697) (LEU728) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Regulatory subunit of Protein kinase A |Cow (Bos taurus) [TaxId: 9913]
d1w62b_ : (SER331) (GLY388) [view usage] : d.21.1.0 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
d2rl1a_ : (GLN274) (GLN309) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |automated matches |Haemophilus influenzae [TaxId: 727]
d1ezga_ : (ASN38) (CYS76) [view usage] : b.80.2.1 |Single-stranded right-handed beta-helix |Insect cysteine-rich antifreeze protein |Insect cysteine-rich antifreeze protein |Insect cysteine-rich antifreeze protein |Yellow mealworm (Tenebrio molitor) [TaxId: 7067]
d2rftb_ : (SER129) (GLY155) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza b virus (strain b/hong kong/8/73) [TaxId: 11531]
d1wbfa_ : (SER45) (PRO83) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.80, b.82, d.68, d.58, b.29, c.72, b.40, c.55, b.1, d.21, b.26, h.3, d.219, d.95