Protein Concepts Dictionary

Tableau information

Concept source:  d1x5qa1  amino acid (a.a.) range (GLU15)(GLY63)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: EEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU15)   (GLN24) E1
	   (ILE30)   (GLY34) E2
	   (SER51)   (GLU56) E3
	   (GLY57)   (GLY63) H4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                          
E2     -132.4°   E2                   
E3       43.8°  175.8°   E3            
H4      137.6°   88.6°  -95.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ueqa_ :    (THR19)   (GLY61)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) |Human (Homo sapiens) [TaxId: 9606]
 d4nmqb_ :   (PRO285)  (GLY328)   [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2kv8a_ :     (ARG4)   (GLY40)   [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2edpa_ :     (GLY8)   (GLN52)   [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2l4sa_ :    (GLN14)   (GLY70)   [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1qavb_ :  (ILE1016) (GLY1056)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Neuronal nitric oxide synthase, NNOS |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1v5la_ :     (SER6)   (ASN46)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Alpha-actinin-2 associated LIM protein |Mouse (Mus musculus) [TaxId: 10090]
 d1v5qa_ :    (HIS13)   (GLY62)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Glutamate receptor interacting protein |Mouse (Mus musculus) [TaxId: 10090]
 d3qdoa_ :    (ARG40)   (GLY92)   [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2e7ka_ :     (ARG8)   (GLY46)   [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1v62a_ :    (PRO16)   (GLY59)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Glutamate receptor interacting protein 2, GRIP2 (KIAA1719) |Human (Homo sapiens) [TaxId: 9606]
 d2cs5a1 :    (LEU16)   (CYS57)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Tyrosine-protein phosphatase non-receptor type 4, PTPN4 |Human (Homo sapiens) [TaxId: 9606]
 d2eega_ :     (GLY4)   (ALA48)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ozia_ :    (VAL16)   (GLY62)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Phosphatase hPTP1e |Mouse (Mus musculus) [TaxId: 10090]
 d2m0ta_ :    (LEU11)   (GLY52)   [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1wjla_ :     (SER9)   (SER48)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Zasp (Cypher, Oracle 1) |Mouse (Mus musculus) [TaxId: 10090]
 d1wf7a_ :     (GLY7)   (HIS46)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Enigma homolog ENH |Mouse (Mus musculus) [TaxId: 10090]
 d1x5qa1 :    (GLU15)   (GLY63)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Scribble (KIAA0147) |Human (Homo sapiens) [TaxId: 9606]
 d1qaua_ :    (ASN14)   (GLY56)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Neuronal nitric oxide synthase, NNOS |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1ueza_ :     (SER6)   (GLY52)   [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |KIAA1526 protein |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.36