Tableau information
Concept source: d4e34a_ amino acid (a.a.) range (VAL289)(GLY328)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL289) (GLU294) E1
(ILE301) (GLY305) E2
(SER316) (GLY321) E3
(GLN322) (GLY328) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -125.3° E2
E3 48.1° 172.8° E3
H4 132.5° 101.7° -84.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4jaoa2 : (ASP215) (GLU250) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1x45a1 : (ASP8) (GLY50) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Amyloid beta A4 precursor protein-binding family A member 1 (APBA1, X11) |Human (Homo sapiens) [TaxId: 9606]
d1ee0b2 : (ILE241) (LEU292) [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Pyrone synthase (PyS, chalcone synthase 2) |Gerbera hybrid cultivar [TaxId: 18101]
d1g59a2 : (PRO143) (PRO174) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Glutamyl-tRNA synthetase (GluRS) |Thermus thermophilus [TaxId: 274]
d1zq1a2 : (PRO92) (PRO128) [view usage] : c.88.1.1 |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD |Pyrococcus abyssi [TaxId: 29292]
d3sv7a_ : (MET986) (THR1022) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
d4c8ea_ : (ARG4) (ALA55) [view usage] : d.79.5.0 |Bacillus chorismate mutase-like |IpsF-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d2z1aa2 : (PHE28) (ALA73) [view usage] : d.159.1.2 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain |5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain |Thermus thermophilus [TaxId: 274]
d2vrfa_ : (PRO112) (ARG155) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4b0na2 : (ASP269) (LYS319) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Ectocarpus siliculosus [TaxId: 2880]
d4wh6a_ : (MET986) (THR1022) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
d1kwaa_ : (ARG487) (GLY528) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |Cask/Lin-2 |Human (Homo sapiens) [TaxId: 9606]
d3mfe2_ : (ALA480) (SER522) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d4e34a_ : (VAL289) (GLY328) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3sv9a_ : (MET986) (THR1022) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
d3o46a_ : (SER136) (GLY177) [view usage] : b.36.1.0 |PDZ domain-like |PDZ domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.159, c.26, b.47, c.95, d.153, d.79, c.88, b.36