Tableau information
Concept source: d2bjra2 amino acid (a.a.) range (GLY326)(CYS354)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY326) (ARG331) E1
(GLU333) (GLY338) E2
(THR342) (GLY348) E3
(GLY348) (CYS354) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 161.7° E2
E3 -31.8° 166.5° E3
H4 -118.1° 72.7° -98.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1hpga_ : (GLY196) (ALA236) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Glutamic acid-specific protease |Streptomyces griseus [TaxId: 1911]
d2fiaa1 : (ARG51) (GLY91) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Probable acetyltransferase EF1919 |Enterococcus faecalis [TaxId: 1351]
d1zagc2 : (GLY6) (VAL57) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Zinc-alpha-2-glycoprotein, ZAG |Human (Homo sapiens) [TaxId: 9606]
d1iq8a4 : (ALA459) (VAL502) [view usage] : d.17.6.1 |Cystatin-like |Pre-PUA domain |Archaeosine tRNA-guanine transglycosylase, C2 domain |Archaeosine tRNA-guanine transglycosylase, C2 domain |Pyrococcus horikoshii [TaxId: 53953]
d1zaga2 : (GLY6) (VAL57) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Zinc-alpha-2-glycoprotein, ZAG |Human (Homo sapiens) [TaxId: 9606]
d1oyga_ : (LYS352) (PHE409) [view usage] : b.67.2.2 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Levansucrase |Levansucrase |Bacillus subtilis [TaxId: 1423]
d1g6za_ : (VAL14) (SER48) [view usage] : b.34.13.2 |SH3-like barrel |Chromo domain-like |Chromo domain |Histone methyltransferase clr4, chromo domain |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d1t7va2 : (GLY6) (VAL57) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Zinc-alpha-2-glycoprotein, ZAG |Human (Homo sapiens) [TaxId: 9606]
d1aora1 : (ARG284) (LEU322) [view usage] : a.110.1.1 |Aldehyde ferredoxin oxidoreductase, C-terminal domains |Aldehyde ferredoxin oxidoreductase, C-terminal domains |Aldehyde ferredoxin oxidoreductase, C-terminal domains |Aldehyde ferredoxin oxidoreductase |Pyrococcus furiosus [TaxId: 2261]
d3isqa1 : (LEU45) (LYS88) [view usage] : d.32.1.3 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Extradiol dioxygenases |4-hydroxyphenylpyruvate dioxygenase, HppD |Human (Homo sapiens) [TaxId: 9606]
d3s8ya_ : (SER2) (GLY43) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Oleispira antarctica [TaxId: 188908]
d3i6ya_ : (SER2) (GLY43) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Oleispira antarctica [TaxId: 188908]
d1k1za_ : (THR46) (HIS74) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Vav N-terminal SH3 domain |Mouse (Mus musculus) [TaxId: 10090]
d1o7zb_ : (LYS26) (ASN63) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |IP-10/CXCL10 |Human (Homo sapiens) [TaxId: 9606]
d1o7yb_ : (LYS26) (SER58) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |IP-10/CXCL10 |Human (Homo sapiens) [TaxId: 9606]
d3gvka1 : (THR524) (PRO563) [view usage] : b.68.1.2 |6-bladed beta-propeller |Sialidases |Endo-alpha-sialidase |automated matches |Enterobacteria phage [TaxId: 344021]
d2bm4a1 : (GLY136) (GLY177) [view usage] : b.80.8.1 |Single-stranded right-handed beta-helix |Pentapeptide repeat-like |Pentapeptide repeats |Hypothetical protein Rv3361c (MT3469) |Mycobacterium tuberculosis [TaxId: 1773]
d4v19f_ : (PRO46) (THR89) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, mitochondrial (54S or 39S subunit) |Pig (Sus scrofa) [TaxId: 9823]
d2sfaa_ : (GLY148) (TYR186) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Serine proteinase |Streptomyces fradiae [TaxId: 1906]
d1sqia1 : (LEU45) (GLY90) [view usage] : d.32.1.3 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Extradiol dioxygenases |4-hydroxyphenylpyruvate dioxygenase, HppD |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1frta2 : (LEU7) (GLU54) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Fc (IgG) receptor, alpha-1 and alpha-2 domains |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2gpia1 : (GLN3) (ALA44) [view usage] : d.354.1.1 |Shew3726-like |Shew3726-like |Shew3726-like |Hypothetical protein Shew3726 |Shewanella loihica [TaxId: 359303]
d2xzm9_ : (GLY122) (UNK169) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d3r9pa1 : (ARG8) (HIS51) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Mycobacterium avium [TaxId: 1770]
d4gnia1 : (HIS100) (LEU146) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Chaetomium thermophilum [TaxId: 759272]
d4kfqa_ : (GLY26) (ASN79) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |N-methyl-D-aspartate receptor subunit 1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.80, c.69, c.94, i.1, b.67, b.47, c.55, d.32, d.108, d.17, d.19, b.34, d.9, a.110, b.169, d.354