Tableau information
Concept source: d3eyoa1 amino acid (a.a.) range (ALA9)(ILE48)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA9) (LEU13) E1
(GLU17) (SER26) E2
(TYR32) (PRO40) E3
(ALA43) (ILE48) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 165.5° E2
E3 -68.4° 125.5° E3
E4 82.1° -85.1° 147.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1g0da1 : (ARG31) (LYS71) [view usage] : b.1.18.9 |Immunoglobulin-like beta-sandwich |E set domains |Transglutaminase N-terminal domain |Transglutaminase N-terminal domain |Red sea bream (Chrysophrys major) [TaxId: 143350]
d1bfsa_ : (VAL251) (ASP297) [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p50 subunit of NF-kappa B transcription factor |Mouse (Mus musculus) [TaxId: 10090]
d4gw4b1 : (SER9) (ILE46) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1lmia_ : (ALA93) (GLU130) [view usage] : b.1.19.1 |Immunoglobulin-like beta-sandwich |Antigen MPT63/MPB63 (immunoprotective extracellular protein) |Antigen MPT63/MPB63 (immunoprotective extracellular protein) |Antigen MPT63/MPB63 (immunoprotective extracellular protein) |Mycobacterium tuberculosis [TaxId: 1773]
d1iilg2 : (ALA264) (LYS313) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fibroblast growth factor receptor, FGFR |Human (Homo sapiens), FGFR2a [TaxId: 9606]
d3ft1a_ : (LYS59) (PHE100) [view usage] : b.7.3.0 |C2 domain-like |PHL pollen allergen |automated matches |automated matches |Timothy grass (Phleum pratense) [TaxId: 15957]
d4dhla1 : (VAL30) (LYS71) [view usage] : b.1.12.0 |Immunoglobulin-like beta-sandwich |Purple acid phosphatase, N-terminal domain |automated matches |automated matches |French bean (Phaseolus vulgaris) [TaxId: 3885]
d1ry7b2 : (ALA261) (THR311) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fibroblast growth factor receptor, FGFR |Human (Homo sapiens), FGFR3c [TaxId: 9606]
d1iknc_ : (VAL251) (PHE295) [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p50 subunit of NF-kappa B transcription factor |Mouse (Mus musculus) [TaxId: 10090]
d3skje_ : (LEU30) (GLU66) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4dhlc1 : (VAL30) (GLY72) [view usage] : b.1.12.0 |Immunoglobulin-like beta-sandwich |Purple acid phosphatase, N-terminal domain |automated matches |automated matches |French bean (Phaseolus vulgaris) [TaxId: 3885]
d3dvga1 : (SER9) (SER50) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Human (Homo sapiens), cluster 3.2 [TaxId: 9606]
d1imhc2 : (PRO238) (ASP285) [view usage] : b.2.5.3 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |Rel/Dorsal transcription factors, DNA-binding domain |T-cell transcription factor NFAT5 (TONEBP), DNA-binding domain |Human (Homo sapiens) [TaxId: 9606]
d3jssa_ : (LEU281) (ARG323) [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4aiva_ : (ASP6) (GLY49) [view usage] : b.33.1.0 |ISP domain |ISP domain |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d3mr1b_ : (TYR209) (THR247) [view usage] : d.127.1.0 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |automated matches |automated matches |Rickettsia prowazekii [TaxId: 782]
d1hwwa2 : (PHE577) (THR614) [view usage] : b.30.5.6 |Supersandwich |Galactose mutarotase-like |alpha-mannosidase, C-terminal domain |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2vxqa_ : (PRO59) (PRO94) [view usage] : b.7.3.1 |C2 domain-like |PHL pollen allergen |PHL pollen allergen |automated matches |Timothy grass (Phleum pratense) [TaxId: 15957]
d1c82a3 : (LYS676) (GLU720) [view usage] : b.30.5.2 |Supersandwich |Galactose mutarotase-like |Hyaluronate lyase-like, central domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d3juza_ : (LEU281) (ARG323) [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4ouoa1 : (SER8) (ILE47) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d4fo7a_ : (PRO211) (THR248) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d2p0ma1 : (ILE285) (PRO334) [view usage] : a.119.1.2 |Lipoxigenase |Lipoxigenase |Animal lipoxigenases |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1cmsa_ : (GLY169) (THR217) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Chymosin (synonym: renin) |Cow (Bos taurus) [TaxId: 9913]
d3czua_ : (LEU54) (GLU90) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3da0b2 : (ALA117) (LYS151) [view usage] : b.21.1.0 |Virus attachment protein globular domain |Virus attachment protein globular domain |automated matches |automated matches |Lactococcus phage [TaxId: 35345]
d2p23a_ : (LEU79) (LEU113) [view usage] : b.42.1.0 |beta-Trefoil |Cytokine |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3gxmc1 : (ILE5) (ALA58) [view usage] : b.71.1.2 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 |Glucosylceramidase |Human (Homo sapiens) [TaxId: 9606]
d2df4b2 : (GLU101) (LEU141) [view usage] : d.128.1.5 |Glutamine synthetase/guanido kinase |Glutamine synthetase/guanido kinase |GatB/GatE catalytic domain-like |Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, N-terminal domain |Staphylococcus aureus [TaxId: 1280]
d1ojoa3 : (LYS676) (GLU720) [view usage] : b.30.5.2 |Supersandwich |Galactose mutarotase-like |Hyaluronate lyase-like, central domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1fltx_ : (GLU144) (PRO179) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Second domain of the Flt-1 receptor |Human (Homo sapiens) [TaxId: 9606]
d1o0xa_ : (TRP215) (THR252) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Methionine aminopeptidase |Thermotoga maritima [TaxId: 2336]
d2m2da_ : (ALA40) (LYS78) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Programmed cell death protein 1, PD1, extracellular domain |Human (Homo sapiens) [TaxId: 9606]
d4et7a_ : (GLU84) (ASN120) [view usage] : b.18.1.4 |Galactose-binding domain-like |Galactose-binding domain-like |Ephrin receptor ligand binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1flha_ : (GLY168) (THR216) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Pepsin(ogen) |Human (Homo sapiens), isoform 3A [TaxId: 9606]
d3mr1a_ : (TYR209) (THR247) [view usage] : d.127.1.0 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |automated matches |automated matches |Rickettsia prowazekii [TaxId: 782]
d1k4ra_ : (PRO272) (GLY301) [view usage] : i.17.1.1 |Virus envelope proteins |Virus envelope proteins |Virus envelope proteins |Virus envelope proteins |Dengue virus [TaxId: 12637]
d4jamb1 : (PRO8) (ILE48) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3grwa2 : (GLN263) (LEU309) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1kbpa1 : (GLN28) (LYS71) [view usage] : b.1.12.1 |Immunoglobulin-like beta-sandwich |Purple acid phosphatase, N-terminal domain |Purple acid phosphatase, N-terminal domain |Purple acid phosphatase, N-terminal domain |French bean (Phaseolus vulgaris) [TaxId: 3885]
d1pj5a1 : (THR775) (THR814) [view usage] : b.44.2.1 |Elongation factor/aminomethyltransferase common domain |Aminomethyltransferase beta-barrel domain |Aminomethyltransferase beta-barrel domain |N,N-dimethylglycine oxidase, C-terminal domain |Arthrobacter globiformis [TaxId: 1665]
d2rqaa_ : (LEU621) (LYS650) [view usage] : b.88.2.1 |Mss4-like |RIG-I C-terminal-like |RIG-I C-terminal domain-like |LGP2 C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2p12b_ : (GLY89) (ASP119) [view usage] : b.175.1.1 |FomD barrel-like |FomD-like |FomD-like |Hypothetical protein RHA1_ro00977 |Rhodococcus sp. RHA1 [TaxId: 101510]
d2f2ab2 : (ASN102) (LEU141) [view usage] : d.128.1.5 |Glutamine synthetase/guanido kinase |Glutamine synthetase/guanido kinase |GatB/GatE catalytic domain-like |Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, N-terminal domain |Staphylococcus aureus [TaxId: 1280]
d2a0sa1 : (ASP18) (THR46) [view usage] : d.96.1.2 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |6-pyruvoyl tetrahydropterin synthase |6-pyruvoyl tetrahydropterin synthase |Plasmodium vivax [TaxId: 5855]
d3c7xa_ : (ARG464) (GLY496) [view usage] : b.66.1.0 |4-bladed beta-propeller |Hemopexin-like domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2f1aa2 : (PHE577) (THR614) [view usage] : b.30.5.6 |Supersandwich |Galactose mutarotase-like |alpha-mannosidase, C-terminal domain |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1dzda_ : (LEU58) (GLN91) [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Human (Homo sapiens) [TaxId: 9606]
d1y6ha_ : (ASP93) (GLY135) [view usage] : d.167.1.1 |Peptide deformylase |Peptide deformylase |Peptide deformylase |Peptide deformylase |Leptospira interrogans [TaxId: 173]
d1u3za_ : (VAL251) (PHE295) [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p50 subunit of NF-kappa B transcription factor |Mouse (Mus musculus) [TaxId: 10090]
d3tloa_ : (PRO147) (SER195) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Human coronavirus [TaxId: 443239]
d1jk4a_ : (PRO53) (THR81) [view usage] : b.9.1.1 |Neurophysin II |Neurophysin II |Neurophysin II |Neurophysin II |Cow (Bos taurus) [TaxId: 9913]
d2qhlc_ : (LYS4) (VAL47) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Ictalurus punctatus [TaxId: 7998]
d1gjia1 : (LEU185) (LYS227) [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p65 subunit of NF-kappa B (NFKB), dimerization domain |Chicken (Gallus gallus), C-rel [TaxId: 9031]
d4p49a1 : (SER6) (ILE43) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1n47a_ : (ALA53) (VAL122) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]
d2p84a1 : (GLU27) (GLU74) [view usage] : b.172.1.1 |YopX-like |YopX-like |YopX-like |Orf041 product |Staphylococcus phage 37 [TaxId: 320840]
d2hp4a_ : (GLN2) (GLN54) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1akjd_ : (GLN2) (GLN54) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |CD8 |Human (Homo sapiens) [TaxId: 9606]
d1bqub2 : (HIS108) (PRO155) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Cytokine receptor gp130 cytokine-binding domains |Human (Homo sapiens) [TaxId: 9606]
d2cnya_ : (THR24) (ASP68) [view usage] : b.2.3.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Pilus subunits |automated matches |Salmonella typhimurium [TaxId: 90371]
d1dp4a_ : (ASN354) (VAL390) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Hormone binding domain of the atrial natriuretic peptide receptor |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1htya2 : (PHE577) (THR614) [view usage] : b.30.5.6 |Supersandwich |Galactose mutarotase-like |alpha-mannosidase, C-terminal domain |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1flty_ : (GLU144) (PRO179) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Second domain of the Flt-1 receptor |Human (Homo sapiens) [TaxId: 9606]
d3mx6b_ : (ASP210) (THR247) [view usage] : d.127.1.0 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |automated matches |automated matches |Rickettsia prowazekii [TaxId: 782]
d2xacc_ : (GLU141) (PRO179) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2agjh2 : (THR127) (ARG173) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain mu constant domain 1, CH1-mu |Human (Homo sapiens) [TaxId: 9606]
d1ibqa_ : (GLY167) (GLY200) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Acid protease |Fungus (Aspergillus phoenicis), aspergillopepsin [TaxId: 5063]
d2co6a_ : (LEU23) (ASP68) [view usage] : b.2.3.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Pilus subunits |automated matches |Salmonella typhimurium [TaxId: 99287]
d1mbya_ : (LYS849) (GLY894) [view usage] : d.223.1.1 |Polo-box domain |Polo-box domain |Swapped Polo-box domain |Serine/threonine-protein kinase Sak C-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
d1l9ma1 : (GLU28) (PHE73) [view usage] : b.1.18.9 |Immunoglobulin-like beta-sandwich |E set domains |Transglutaminase N-terminal domain |Transglutaminase N-terminal domain |Human (Homo sapiens), TGase E3 [TaxId: 9606]
d1xmwa1 : (LYS9) (PRO39) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |CD3 epsilon chain ectodomain fragment |Mouse (Mus musculus) [TaxId: 10090]
d3do7a2 : (GLU280) (SER327) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1e50q_ : (PHE70) (ARG118) [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Human (Homo sapiens) [TaxId: 9606]
d1xzwa1 : (VAL28) (MET70) [view usage] : b.1.12.1 |Immunoglobulin-like beta-sandwich |Purple acid phosphatase, N-terminal domain |Purple acid phosphatase, N-terminal domain |Purple acid phosphatase, N-terminal domain |Sweet potato (Ipomoea batatas) [TaxId: 4120]
d1ahsa_ : (VAL215) (VAL247) [view usage] : b.19.1.1 |Viral protein domain |Viral protein domain |Top domain of virus capsid protein |RDV p8, central (top) domain |African horse sickness virus [TaxId: 40050]
d2cdga1 : (GLN10) (HIS46) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2bqya_ : (GLU7) (ARG42) [view usage] : b.40.5.0 |OB-fold |Inorganic pyrophosphatase |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
d2ahoa2 : (GLU322) (ALA353) [view usage] : b.44.1.1 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |Initiation factor eIF2 gamma subunit |Sulfolobus solfataricus [TaxId: 2287]
d1svba2 : (PRO272) (LYS300) [view usage] : f.10.1.1 |Viral glycoprotein, central and dimerisation domains |Viral glycoprotein, central and dimerisation domains |Viral glycoprotein, central and dimerisation domains |Envelope glycoprotein |Tick-borne encephalitis virus [TaxId: 11084]
d1wfta_ : (SER12) (ARG62) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Host cell factor 2, HCF-2 |Mouse (Mus musculus) [TaxId: 10090]
d2qhla_ : (ASP2) (VAL47) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Ictalurus punctatus [TaxId: 7998]
d1ktke1 : (VAL3) (MET46) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
d1f6fb1 : (HIS10) (GLU50) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Prolactin receptor |Norway rat (Rattus norvegicus) [TaxId: 10116]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.119, b.19, b.29, b.30, b.47, c.93, b.50, b.40, b.18, d.127, b.2, d.96, b.1, b.42, b.21, d.167, d.128, b.7, b.88, d.223,
b.71, i.17, b.33, b.66, b.44, f.10, b.172, b.175, b.9