Tableau information
Concept source: d1eg9b_ amino acid (a.a.) range (ARG615)(ARG665)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG615) (THR621) E1
(ASN622) (ALA626) E2
(GLU633) (ARG648) E3
(GLN651) (ARG665) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -61.1° E2
E3 143.7° -154.7° E3
E4 -53.2° -14.6° 162.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2dtge3 : (GLU469) (LEU505) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Insulin receptor |Human (Homo sapiens) [TaxId: 9606]
d1q2ra_ : (ARG13) (PRO40) [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
d4fyqa1 : (THR79) (HIS123) [view usage] : b.98.1.0 |Zn aminopeptidase N-terminal domain |Zn aminopeptidase N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1g87b2 : (VAL459) (PHE498) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Endo/exocellulase:cellobiose E-4, C-terminal domain |Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]
d1yfna_ : (GLN50) (PRO86) [view usage] : b.136.1.1 |SspB-like |SspB-like |Stringent starvation protein B, SspB |automated matches |Escherichia coli [TaxId: 562]
d4fyra1 : (THR79) (HIS123) [view usage] : b.98.1.0 |Zn aminopeptidase N-terminal domain |Zn aminopeptidase N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3uvia_ : (ARG13) (PRO40) [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
d1nugb2 : (SER481) (THR522) [view usage] : b.1.5.1 |Immunoglobulin-like beta-sandwich |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Human (Homo sapiens), TGase E3 [TaxId: 9606]
d2o1qa1 : (GLY29) (ALA58) [view usage] : b.82.1.21 |Double-stranded beta-helix |RmlC-like cupins |Acetylacetone-cleaving enzyme-like |Putative acetyl/propionyl-CoA carboxylase subunit alpha Mpe_A3659 |Rubrivivax gelatinosus [TaxId: 28068]
d1an8a1 : (ASP26) (MET55) [view usage] : b.40.2.2 |OB-fold |Bacterial enterotoxins |Superantigen toxins, N-terminal domain |Streptococcal superantigen Spe-C |Streptococcus pyogenes [TaxId: 1314]
d1kmoa_ : (ASP331) (GLY398) [view usage] : f.4.3.3 |Transmembrane beta-barrels |Porins |Ligand-gated protein channel |Outer membrane transporter FecA |Escherichia coli [TaxId: 562]
d2b8ma1 : (LYS15) (TYR43) [view usage] : b.82.1.18 |Double-stranded beta-helix |RmlC-like cupins |MJ0764-like |Hypothetical protein MJ0764 |Methanococcus jannaschii [TaxId: 2190]
d3vi3a1 : (THR411) (ARG447) [view usage] : b.69.8.0 |7-bladed beta-propeller |Integrin alpha N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ywxa1 : (MET1) (SER31) [view usage] : d.12.1.3 |Ribosomal proteins S24e, L23 and L15e |Ribosomal proteins S24e, L23 and L15e |Ribosomal protein S24e |Ribosomal protein S24e |Methanococcus maripaludis [TaxId: 39152]
d1hb5b_ : (SER255) (LEU285) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |p3 shell |Bacteriophage PRD1 [TaxId: 10658]
d3e4da_ : (GLY0) (PRO35) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d4l8wb_ : (PHE187) (GLN216) [view usage] : c.23.16.0 |Flavodoxin-like |Class I glutamine amidotransferase-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d3vl8a_ : (GLY35) (THR75) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Fungus (Aspergillus aculeatus) [TaxId: 5053]
d2axto1 : (GLY221) (PRO271) [view usage] : f.4.1.4 |Transmembrane beta-barrels |OMPA-like |PsbO-like |Manganese-stabilising protein, PsbO |Thermosynechococcus elongatus [TaxId: 146786]
d1tuha_ : (PHE86) (VAL118) [view usage] : d.17.4.11 |Cystatin-like |NTF2-like |Hypothetical protein egc068 from a soil-derived mobile gene cassette |Hypothetical protein egc068 from a soil-derived mobile gene cassette |uncultured organism [TaxId: 155900]
d1t0va1 : (GLY92) (ARG133) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Bilin-binding protein |Cabbage butterfly (Pieris brassicae) [TaxId: 7116]
d1hehc_ : (CYS560) (ASN593) [view usage] : b.2.2.1 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family II |Endo-1,4-beta xylanase D, xylan binding domain, XBD |Cellulomonas fimi [TaxId: 1708]
d1xuva_ : (GLY55) (GLY87) [view usage] : d.129.3.5 |TBP-like |Bet v1-like |AHSA1 domain |Hypothetical protein MM0500 |Methanosarcina mazei [TaxId: 2209]
d3u6ra_ : (VAL4) (ARG34) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1x5la1 : (GLN8) (GLU43) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Ephrin type-A receptor 8 |Human (Homo sapiens) [TaxId: 9606]
d1efza_ : (ARG13) (PRO40) [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
d3p31d_ : (THR122) (PRO157) [view usage] : d.299.1.1 |Ns1 effector domain-like |Ns1 effector domain-like |Ns1 effector domain-like |automated matches |Influenza A virus [TaxId: 680789]
d2a73b8 : (LYS1524) (SER1551) [view usage] : b.40.3.3 |OB-fold |TIMP-like |Netrin-like domain (NTR/C345C module) |Complement C3 domain C345C |Human (Homo sapiens) [TaxId: 9606]
d4i83a_ : (GLY107) (LYS146) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Neisseria meningitidis [TaxId: 272831]
d4hqva_ : (ARG13) (PRO40) [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 264203]
d1l9xa_ : (PHE189) (GLN218) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |gamma-glutamyl hydrolase |Human (Homo sapiens) [TaxId: 9606]
d1gw7b_ : (SER2255) (LEU2285) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |p3 shell |Bacteriophage PRD1 [TaxId: 10658]
d1v70a_ : (LYS16) (GLY48) [view usage] : b.82.1.9 |Double-stranded beta-helix |RmlC-like cupins |TM1287-like |Hypothetical protein TTHA0104 |Thermus thermophilus [TaxId: 274]
d2xzmw_ : (LYS124) (PHE151) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d1kf9b2 : (VAL329) (GLU380) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Growth hormone receptor |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.82, c.69, b.69, i.1, b.29, d.129, i.6, c.23, f.4, b.40, b.60, b.2, b.1, d.17, d.38, b.136, d.299, b.98, d.12