Tableau information
Concept source: d2feja_ amino acid (a.a.) range (ARG110)(SER149)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG110) (LEU114) E1
(THR123) (SER127) E2
(ASN131) (GLN136) E3
(LYS139) (SER149) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -134.2° E2
E3 40.0° 158.9° E3
E4 140.5° -48.7° 152.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2ei9a_ : (ALA61) (SER103) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Silkworm (Bombyx mori) [TaxId: 7091]
d3d0ab_ : (ARG110) (ASP148) [view usage] : b.2.5.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |p53 DNA-binding domain-like |p53 tumor suppressor, DNA-binding domain |Human (Homo sapiens) [TaxId: 9606]
d2ze0a2 : (PHE514) (ILE548) [view usage] : b.71.1.0 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |automated matches |automated matches |Geobacillus sp. [TaxId: 258999]
d1soua_ : (SER81) (ASN108) [view usage] : c.124.1.6 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |Methenyltetrahydrofolate synthetase |Hypothetical protein aq_1731 |Aquifex aeolicus [TaxId: 63363]
d1wofa_ : (LYS102) (GLY138) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |SARS coronavirus [TaxId: 227859]
d2vokb_ : (HIS16) (GLY61) [view usage] : b.29.1.22 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |SPRY domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2iwge_ : (HIS2) (GLY50) [view usage] : b.29.1.22 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |SPRY domain |52 kDa Ro protein |Human (Homo sapiens) [TaxId: 9606]
d4n7ua_ : (LEU306) (CYS357) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4unwa_ : (GLU119) (PRO169) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/eq/newmarket/93/(h3n8)) [TaxId: 159470]
d1a6xa_ : (ALA76) (ALA129) [view usage] : b.84.1.1 |Barrel-sandwich hybrid |Single hybrid motif |Biotinyl/lipoyl-carrier proteins and domains |Biotinyl domain of acetyl-CoA carboxylase |Escherichia coli [TaxId: 562]
d3ooja1 : (ARG202) (LEU238) [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1qdlb_ : (SER137) (GLN173) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |Anthranilate synthase GAT subunit, TrpG |Sulfolobus solfataricus [TaxId: 2287]
d1hn0a3 : (LYS982) (PRO1021) [view usage] : b.24.1.1 |Hyaluronate lyase-like, C-terminal domain |Hyaluronate lyase-like, C-terminal domain |Hyaluronate lyase-like, C-terminal domain |Chondroitin ABC lyase I |Proteus vulgaris [TaxId: 585]
d1ut2h_ : (ARG78) (VAL116) [view usage] : b.2.3.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Dr-family adhesin |DraA/Afimbrial adhesin Afa-III |Escherichia coli [TaxId: 562]
d4n7ia_ : (LEU306) (CYS357) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4bj0a_ : (GLY27) (PRO77) [view usage] : b.18.1.14 |Galactose-binding domain-like |Galactose-binding domain-like |CBM4/9 |automated matches |Rhodothermus marinus [TaxId: 29549]
d2voka_ : (HIS16) (GLY61) [view usage] : b.29.1.22 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |SPRY domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1xffb_ : (ARG202) (GLU235) [view usage] : d.153.1.1 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Class II glutamine amidotransferases |Glucosamine 6-phosphate synthase, N-terminal domain |Escherichia coli [TaxId: 562]
d3oojc1 : (ARG202) (SER236) [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Escherichia coli [TaxId: 562]
d3qyna_ : (PHE138) (MET177) [view usage] : b.2.5.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |p53 DNA-binding domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2fe0a1 : (ASP70) (ILE102) [view usage] : b.134.1.1 |Smp-1-like |Smp-1-like |Smp-1-like |Small myristoylated protein 1, Smp-1 |Leishmania major [TaxId: 5664]
d1wd3a1 : (GLY235) (TYR271) [view usage] : b.29.1.21 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Alpha-L-arabinofuranosidase B, N-terminal domain |Alpha-L-arabinofuranosidase B, N-terminal domain |Aspergillus kawachii [TaxId: 40384]
d2d04c_ : (ASN61) (PRO99) [view usage] : b.78.1.0 |beta-Prism II |alpha-D-mannose-specific plant lectins |automated matches |automated matches |Curculigo latifolia [TaxId: 4676]
d1gsla_ : (GLU21) (SER55) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |West-central african legume (Griffonia simplicifolia) [TaxId: 3850]
d1gzhc_ : (ARG110) (ASP148) [view usage] : b.2.5.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |p53 DNA-binding domain-like |p53 tumor suppressor, DNA-binding domain |Human (Homo sapiens) [TaxId: 9606]
d1kzya_ : (ARG110) (ASP148) [view usage] : b.2.5.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |p53 DNA-binding domain-like |p53 tumor suppressor, DNA-binding domain |Human (Homo sapiens) [TaxId: 9606]
d3tloa_ : (VAL101) (GLY137) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Human coronavirus [TaxId: 443239]
d1su1c_ : (ILE139) (ASN183) [view usage] : d.159.1.7 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |YfcE-like |Phosphodiesterase yfcE |Escherichia coli [TaxId: 562]
d2fbec_ : (VAL10) (THR61) [view usage] : b.29.1.22 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |SPRY domain |Similar to Ret finger protein-like 1 |Human (Homo sapiens) [TaxId: 9606]
d3zo0b_ : (HIS7) (GLY55) [view usage] : b.29.1.22 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |SPRY domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1o97d1 : (GLY113) (PHE145) [view usage] : c.26.2.3 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |ETFP subunits |Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain |Methylophilus methylotrophus [TaxId: 17]
d3r0qc_ : (ASN331) (GLU383) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1rwra_ : (GLY2) (PHE36) [view usage] : b.80.1.11 |Single-stranded right-handed beta-helix |Pectin lyase-like |Filamentous hemagglutinin FhaB, secretion domain |Filamentous hemagglutinin FhaB, secretion domain |Bordetella pertussis [TaxId: 520]
d1x9ea2 : (GLU353) (ASN383) [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |3-hydroxy-3-methylglutaryl CoA synthase MvaS |Enterococcus faecalis [TaxId: 1351]
d2wl1a_ : (VAL598) (PRO646) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1cn1a_ : (ASP139) (PHE175) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Concanavalin A |Jack bean (Canavalia ensiformis) [TaxId: 3823]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, b.19, d.159, b.29, c.26, b.47, c.66, c.124, c.23, c.95, d.153, d.151, b.18, b.2, b.84, b.71, b.24, b.78, b.134