Tableau information
Concept source: d1dbna_ amino acid (a.a.) range (GLU3)(TRP59)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU3) (ASN9) E1
(ASP17) (GLY22) E2
(SER46) (TYR52) E3
(ALA54) (TRP59) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -70.1° E2
E3 126.5° 163.2° E3
E4 -141.9° -97.6° 70.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ufla_ : (VAL33) (ILE63) [view usage] : d.58.5.1 |Ferredoxin-like |GlnB-like |Prokaryotic signal transducing protein |PII (product of glnB) |Thermus thermophilus [TaxId: 274]
d3ozua2 : (GLY153) (GLU186) [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Ralstonia eutropha [TaxId: 381666]
d1fl7d_ : (LYS54) (CYS84) [view usage] : g.17.1.4 |Cystine-knot cytokines |Cystine-knot cytokines |Gonadodropin/Follitropin |Follicle stimulating hormone, follitropin, beta chain |Human (Homo sapiens) [TaxId: 9606]
d4ohja1 : (ASN105) (THR131) [view usage] : b.40.2.2 |OB-fold |Bacterial enterotoxins |Superantigen toxins, N-terminal domain |automated matches |Staphylococcus aureus [TaxId: 1280]
d4mqwb_ : (LYS54) (CYS84) [view usage] : g.17.1.4 |Cystine-knot cytokines |Cystine-knot cytokines |Gonadodropin/Follitropin |Follicle stimulating hormone, follitropin, beta chain |Human (Homo sapiens) [TaxId: 9606]
d2z76a_ : (PHE103) (GLY136) [view usage] : d.17.4.3 |Cystatin-like |NTF2-like |Ketosteroid isomerase-like |Hypothetical protein Rv0760c |Mycobacterium tuberculosis H37Rv [TaxId: 83332]
d1dbna_ : (GLU3) (TRP59) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Maackia amurensis, leukoagglutinin [TaxId: 37501]
d4ay9b_ : (LYS54) (CYS84) [view usage] : g.17.1.4 |Cystine-knot cytokines |Cystine-knot cytokines |Gonadodropin/Follitropin |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1w99a3 : (GLY559) (SER603) [view usage] : b.18.1.3 |Galactose-binding domain-like |Galactose-binding domain-like |delta-Endotoxin, C-terminal domain |delta-Endotoxin, C-terminal domain |Bacillus thuringiensis, Cry4Ba [TaxId: 1428]
d4acca_ : (SER35) (GLY63) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1aw7a1 : (ASN65) (THR91) [view usage] : b.40.2.2 |OB-fold |Bacterial enterotoxins |Superantigen toxins, N-terminal domain |Toxic shock syndrome toxin-1 (TSST-1) |Staphylococcus aureus [TaxId: 1280]
d3fpqa_ : (VAL93) (SER118) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Protein kinase wnk1 |Human (Homo sapiens) [TaxId: 9606]
d4l0ga_ : (SER467) (LEU499) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |automated matches |Caldicellulosiruptor bescii [TaxId: 521460]
d4gv8d_ : (TYR27) (SER52) [view usage] : b.85.4.0 |beta-clip |dUTPase-like |automated matches |automated matches |Staphylococcus phage [TaxId: 12360]
d1xtsa_ : (ILE39) (GLU66) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wd3a1 : (TYR117) (GLU150) [view usage] : b.29.1.21 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Alpha-L-arabinofuranosidase B, N-terminal domain |Alpha-L-arabinofuranosidase B, N-terminal domain |Aspergillus kawachii [TaxId: 40384]
d2q15a_ : (THR59) (HIS89) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |beta-secretase (memapsin) |Human (Homo sapiens) [TaxId: 9606]
d4oeta_ : (VAL33) (HIS74) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d1g9ja_ : (SER461) (LEU495) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Processive endocellulase CelF (Cel48F) |Clostridium cellulolyticum [TaxId: 1521]
d1xwdb1 : (LYS54) (CYS84) [view usage] : g.17.1.4 |Cystine-knot cytokines |Cystine-knot cytokines |Gonadodropin/Follitropin |Follicle stimulating hormone, follitropin, beta chain |Human (Homo sapiens) [TaxId: 9606]
d3zeza_ : (TYR27) (SER52) [view usage] : b.85.4.0 |beta-clip |dUTPase-like |automated matches |automated matches |Staphylococcus phage [TaxId: 53369]
d2b24b_ : (ARG601) (GLY633) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |automated matches |Rhodococcus sp. [TaxId: 92694]
d1f9da_ : (SER461) (LEU495) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Processive endocellulase CelF (Cel48F) |Clostridium cellulolyticum [TaxId: 1521]
d1gff2_ : (ILE13) (LEU42) [view usage] : b.121.5.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Microviridae-like VP |Microvirus capsid proteins |Bacteriophage G4 [TaxId: 10843]
d2biba1 : (VAL453) (GLY477) [view usage] : b.109.1.1 |beta-hairpin stack |Cell wall binding repeat |Cell wall binding repeat |Teichoic acid phosphorylcholine esterase Pce (LytD), C-terminal domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2d43a1 : (TYR117) (GLU150) [view usage] : b.29.1.21 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Alpha-L-arabinofuranosidase B, N-terminal domain |automated matches |Aspergillus kawachii [TaxId: 40384]
d2yf1a2 : (ARG178) (PRO206) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d4mqwe_ : (LYS54) (CYS84) [view usage] : g.17.1.4 |Cystine-knot cytokines |Cystine-knot cytokines |Gonadodropin/Follitropin |Follicle stimulating hormone, follitropin, beta chain |Human (Homo sapiens) [TaxId: 9606]
d2oq5a_ : (MET80) (THR115) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1jrkb_ : (LEU75) (GLY102) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |Hypothetical protein PAE3301 |Pyrobaculum aerophilum [TaxId: 13773]
d2ecpa_ : (VAL198) (ALA225) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Maltodextrin phosphorylase (MALP) |Escherichia coli [TaxId: 562]
d1mqwa_ : (SER103) (GLU132) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |ADP-ribose pyrophosphatase |Mycobacterium tuberculosis [TaxId: 1773]
d1xtra_ : (ILE39) (GLU66) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4e8ba1 : (ASN47) (ASP73) [view usage] : b.122.1.0 |PUA domain-like |PUA domain-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1muta_ : (PRO62) (GLY92) [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |Nucleoside triphosphate pyrophosphorylase (MutT) |Escherichia coli [TaxId: 562]
d3fpqb_ : (ASN91) (SER118) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Protein kinase wnk1 |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94, d.58, b.29, b.47, a.102, b.50, d.144, b.40, c.37, b.18, b.121, c.87, b.85, b.122, b.1, d.17, b.109, b.43, d.113, g.17