Tableau information
Concept source: d2zpoa_ amino acid (a.a.) range (ASN68)(GLY109)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN68) (ALA74) E1
(ALA77) (LEU83) E2
(PRO91) (THR100) E3
(GLN101) (GLY109) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -128.6° E2
E3 -57.0° 153.0° E3
E4 139.2° 83.4° -107.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2vmha_ : (LYS916) (HIS955) [view usage] : b.18.1.33 |Galactose-binding domain-like |Galactose-binding domain-like |NPCBM-like |automated matches |Clostridium perfringens [TaxId: 1502]
d1s0ua2 : (LEU407) (GLY437) [view usage] : b.44.1.1 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |Initiation factor eIF2 gamma subunit |Methanococcus jannaschii [TaxId: 2190]
d3le2a_ : (ASN178) (LYS208) [view usage] : e.1.1.0 |Serpins |Serpins |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2ghvc1 : (GLY418) (PHE501) [view usage] : d.318.1.1 |SARS receptor-binding domain-like |SARS receptor-binding domain-like |SARS receptor-binding domain-like |Spike protein S1 |SARS coronavirus [TaxId: 227859]
d2elia_ : (LYS17) (CYS48) [view usage] : g.49.1.1 |Cysteine-rich domain |Cysteine-rich domain |Protein kinase cysteine-rich domain (cys2, phorbol-binding domain) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1psna_ : (GLY78) (GLU105) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Pepsin(ogen) |Human (Homo sapiens), isoform 3A [TaxId: 9606]
d1m44b_ : (GLY145) (ASP174) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Aminoglycoside 2'-N-acetyltransferase |Mycobacterium tuberculosis [TaxId: 1773]
d1oo8a_ : (VAL181) (GLY225) [view usage] : e.1.1.1 |Serpins |Serpins |Serpins |Antitrypsin, alpha-1 |Human (Homo sapiens) [TaxId: 9606]
d2boya_ : (GLY82) (GLN126) [view usage] : b.3.6.0 |Prealbumin-like |Aromatic compound dioxygenase |automated matches |automated matches |Rhodococcus opacus [TaxId: 37919]
d1m4da_ : (GLY145) (ASP174) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Aminoglycoside 2'-N-acetyltransferase |Mycobacterium tuberculosis [TaxId: 1773]
d1m4db_ : (GLY145) (ASP174) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Aminoglycoside 2'-N-acetyltransferase |Mycobacterium tuberculosis [TaxId: 1773]
d2jmca_ : (ASP33) (SER64) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |alpha-Spectrin, SH3 domain |Chicken (Gallus gallus) [TaxId: 9031]
d2d26a1 : (VAL181) (GLY225) [view usage] : e.1.1.1 |Serpins |Serpins |Serpins |Antitrypsin, alpha-1 |Human (Homo sapiens) [TaxId: 9606]
d1aipa1 : (GLU261) (GLY292) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Elongation factor Tu (EF-Tu), domain 2 |Thermus thermophilus [TaxId: 274]
d2ea3a_ : (GLY102) (THR129) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Cellulomonas bogoriensis [TaxId: 301388]
d3fdea_ : (LYS524) (VAL565) [view usage] : b.122.1.12 |PUA domain-like |PUA domain-like |SRA domain-like |E3 ubiquitin-protein ligase UHRF1 |Mouse (Mus musculus) [TaxId: 10090]
d4qfib_ : (ASN67) (ALA105) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ji6a1 : (ILE512) (ASN558) [view usage] : b.18.1.3 |Galactose-binding domain-like |Galactose-binding domain-like |delta-Endotoxin, C-terminal domain |delta-Endotoxin, C-terminal domain |Bacillus thuringiensis, CRY3bb1 [TaxId: 1428]
d2ghwc_ : (GLY418) (ASN505) [view usage] : d.318.1.1 |SARS receptor-binding domain-like |SARS receptor-binding domain-like |SARS receptor-binding domain-like |Spike protein S1 |SARS coronavirus [TaxId: 227859]
d2vmia_ : (LYS916) (HIS955) [view usage] : b.18.1.33 |Galactose-binding domain-like |Galactose-binding domain-like |NPCBM-like |automated matches |Clostridium perfringens [TaxId: 1502]
d1ovad_ : (GLU195) (ILE224) [view usage] : e.1.1.1 |Serpins |Serpins |Serpins |Ovalbumin |Chicken (Gallus gallus) [TaxId: 9031]
d3ne4a_ : (VAL181) (GLY225) [view usage] : e.1.1.1 |Serpins |Serpins |Serpins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1n97a_ : (TRP269) (PRO296) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cyp175a1 |Thermus thermophilus [TaxId: 274]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.104, b.47, b.50, b.18, b.122, d.108, e.1, b.34, d.5, b.43, b.3, b.44, d.318, g.49