Tableau information
Concept source: d2kv3a_ amino acid (a.a.) range (SER64)(PRO131)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER64) (GLY68) E1
(HIS101) (MET105) E2
(THR113) (GLU118) E3
(PHE125) (PRO131) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 130.2° E2
E3 -73.1° 149.8° E3
E4 -38.5° 95.5° -97.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ueka1 : (MET1) (PRO43) [view usage] : d.14.1.5 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |GHMP Kinase, N-terminal domain |4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE |Thermus thermophilus [TaxId: 274]
d3fd4a_ : (GLU160) (GLN219) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |automated matches |Human herpesvirus 4 (strain b95-8) [TaxId: 10377]
d2vu9a2 : (TYR1181) (SER1225) [view usage] : b.42.4.2 |beta-Trefoil |STI-like |Clostridium neurotoxins, C-terminal domain |automated matches |Clostridium botulinum [TaxId: 36826]
d1gmyb_ : (GLY197) (ILE250) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |(Pro)cathepsin B |Human (Homo sapiens) [TaxId: 9606]
d1gl5a_ : (ILE182) (ASP212) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |tyrosine kinase tec |Mouse (Mus musculus) [TaxId: 10090]
d2cfoa1 : (PHE147) (ALA179) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Synechococcus elongatus [TaxId: 32046]
d1bv4a_ : (ASP158) (SER225) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Mannose-binding protein A, C-lectin domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1pyba_ : (ILE66) (SER111) [view usage] : b.40.4.4 |OB-fold |Nucleic acid-binding proteins |Myf domain |Structure-specific tRNA-binding protein TRBP111 |Aquifex aeolicus [TaxId: 63363]
d2kv3a_ : (SER64) (PRO131) [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4cjma_ : (GLN51) (ASP91) [view usage] : b.42.1.0 |beta-Trefoil |Cytokine |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1umra_ : (SER66) (PRO132) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Snake coagglutinin alpha chain |South american rattlesnake (Crotalus durissus terrificus), convulxin [TaxId: 8732]
d1v7pb_ : (PHE60) (LEU123) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Snake coagglutinin beta chain |Snake (Echis multisquamatus), Ems16 [TaxId: 93050]
d2nyya4 : (TYR1181) (LYS1226) [view usage] : b.42.4.2 |beta-Trefoil |STI-like |Clostridium neurotoxins, C-terminal domain |Botulinum neurotoxin |Clostridium botulinum, serotype A [TaxId: 1491]
d3jwnh1 : (ALA115) (THR158) [view usage] : b.2.3.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Pilus subunits |automated matches |Escherichia coli [TaxId: 488477]
d1cwva5 : (TYR951) (SER985) [view usage] : d.169.1.3 |C-type lectin-like |C-type lectin-like |Invasin/intimin cell-adhesion fragment, C-terminal domain |Invasin |Yersinia pseudotuberculosis [TaxId: 633]
d1ukmb_ : (PHE60) (LEU123) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Snake coagglutinin beta chain |Snake (Echis multisquamatus), Ems16 [TaxId: 93050]
d2ihoa2 : (ASP254) (TYR293) [view usage] : d.3.1.18 |Cysteine proteinases |Cysteine proteinases |MOA C-terminal domain-like |Agglutinin MOA |Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]
d1kiub1 : (THR99) (THR158) [view usage] : b.2.3.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Pilus subunits |Mannose-specific adhesin FimH |Escherichia coli [TaxId: 562]
d1kg0c_ : (ILE159) (GLN219) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |EBV gp42 |Epstein-Barr virus [TaxId: 10376]
d4qbba_ : (GLU147) (ASP184) [view usage] : d.3.1.2 |Cysteine proteinases |Cysteine proteinases |FMDV leader protease |automated matches |Foot-and-mouth disease virus [TaxId: 73482]
d4cjmb_ : (GLN51) (ASP91) [view usage] : b.42.1.0 |beta-Trefoil |Cytokine |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1irpa_ : (GLY64) (ARG93) [view usage] : b.42.1.2 |beta-Trefoil |Cytokine |Interleukin-1 (IL-1) |Interleukin-1 receptor antagonist protein |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.26, b.40, d.169, d.14, d.3, b.2, b.42, b.34