Tableau information
Concept source: d3o4gc1 amino acid (a.a.) range (PHE153)(SER192)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE153) (GLY161) E1
(ASP162) (GLY171) E2
(GLY173) (ASN181) E3
(GLY186) (SER192) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 163.3° E2
E3 -35.6° 156.6° E3
E4 110.5° -54.3° 145.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1lmia_ : (TYR3) (ALA56) [view usage] : b.1.19.1 |Immunoglobulin-like beta-sandwich |Antigen MPT63/MPB63 (immunoprotective extracellular protein) |Antigen MPT63/MPB63 (immunoprotective extracellular protein) |Antigen MPT63/MPB63 (immunoprotective extracellular protein) |Mycobacterium tuberculosis [TaxId: 1773]
d4fp8d_ : (GLY263) (ASP291) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d1qwrb_ : (ILE237) (VAL272) [view usage] : b.82.1.3 |Double-stranded beta-helix |RmlC-like cupins |Type I phosphomannose isomerase |Mannose-6-phosphate isomerase ManA |Bacillus subtilis [TaxId: 1423]
d1utca2 : (THR109) (PHE142) [view usage] : b.69.6.1 |7-bladed beta-propeller |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2psmf_ : (THR3) (GLY39) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Interleukin-15 receptor subunit alpha |Mouse (Mus musculus) [TaxId: 10090]
d1goua_ : (SER67) (ARG107) [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Binase |Bacillus intermedius [TaxId: 1400]
d1b9sa_ : (GLY350) (GLY398) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza B virus, different strains [TaxId: 11520]
d1h09a1 : (TRP291) (ASN325) [view usage] : b.109.1.1 |beta-hairpin stack |Cell wall binding repeat |Cell wall binding repeat |C-terminal domain of endolysin |Bacteriophage cp-1 [TaxId: 10747]
d2wwnb_ : (MET9) (LEU55) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |automated matches |Yersinia pseudotuberculosis [TaxId: 633]
d1xfda1 : (GLU147) (ILE179) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1h54b1 : (LEU719) (ALA752) [view usage] : a.102.1.4 |alpha/alpha toroid |Six-hairpin glycosidases |Glycosyltransferase family 36 C-terminal domain |Lactobacillus maltose phosphorylase, central domain |Lactobacillus brevis [TaxId: 1580]
d2gbca1 : (GLN151) (THR184) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1m38a_ : (THR1) (ILE59) [view usage] : b.40.5.1 |OB-fold |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2gzoa1 : (HIS7) (GLU47) [view usage] : d.310.1.1 |VC0467-like |VC0467-like |VC0467-like |Hypotheical protein SO3346 |Shewanella oneidensis [TaxId: 70863]
d1g3ga_ : (ILE62) (ASN112) [view usage] : b.26.1.2 |SMAD/FHA domain |SMAD/FHA domain |FHA domain |Phosphotyrosine binding domain of Rad53 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1z9na_ : (GLU23) (ILE71) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Haemophilus ducreyi [TaxId: 730]
d2zica2 : (ASP465) (GLU501) [view usage] : b.71.1.0 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |automated matches |automated matches |Streptococcus mutans
d3cl2a_ : (GLY408) (ASP460) [view usage] : b.68.1.0 |6-bladed beta-propeller |Sialidases |automated matches |automated matches |Influenza A virus [TaxId: 11320]
d2aqta_ : (ALA32) (ILE80) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Neisseria meningitidis [TaxId: 487]
d1r46b1 : (GLY325) (ILE367) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Melibiase |Human (Homo sapiens) [TaxId: 9606]
d3om2a_ : (ASP95) (GLY149) [view usage] : b.67.2.2 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Levansucrase |Levansucrase |Bacillus megaterium [TaxId: 1404]
d1pzsa_ : (GLN1) (ILE48) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Mycobacterium tuberculosis [TaxId: 1773]
d1ibha_ : (LEU3) (ILE46) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Photobacterium leiognathi [TaxId: 553611]
d3b7ea_ : (TYR406) (ASP460) [view usage] : b.68.1.0 |6-bladed beta-propeller |Sialidases |automated matches |automated matches |Influenza A virus [TaxId: 11320]
d1do5a_ : (GLY87) (VAL131) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Copper chaperone for superoxide dismutase, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1pyla_ : (VAL59) (ARG96) [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Ribonuclease Sa2 |Streptomyces aureofaciens [TaxId: 1894]
d1wl7a1 : (HIS271) (LEU313) [view usage] : b.67.2.1 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |alpha-L-arabinanase-like |Arabinanase-TS |Bacillus thermodenitrificans [TaxId: 33940]
d1qjsa1 : (ALA122) (SER158) [view usage] : b.66.1.1 |4-bladed beta-propeller |Hemopexin-like domain |Hemopexin-like domain |Hemopexin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1ohza_ : (GLY5) (GLY53) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cohesin domain |Clostridium thermocellum, cellulosome, various modules [TaxId: 1515]
d1n7ua_ : (PHE463) (ILE506) [view usage] : b.126.1.1 |Adsorption protein p2 |Adsorption protein p2 |Adsorption protein p2 |Adsorption protein p2 |Bacteriophage PRD1 [TaxId: 10658]
d1xtmb_ : (HIS43) (ILE87) [view usage] : b.1.8.0 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1di9a_ : (THR7) (ALA40) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |MAP kinase p38 |Human (Homo sapiens) [TaxId: 9606]
d3zq3a_ : (GLN62) (GLU102) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1uzya_ : (LYS55) (VAL126) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]
d1sqja1 : (PHE292) (ASP338) [view usage] : b.69.13.1 |7-bladed beta-propeller |Oligoxyloglucan reducing end-specific cellobiohydrolase |Oligoxyloglucan reducing end-specific cellobiohydrolase |Oligoxyloglucan reducing end-specific cellobiohydrolase |Yeast (Geotrichum sp. M128) [TaxId: 203496]
d2enpa_ : (LEU15) (THR72) [view usage] : b.7.1.0 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3d4aa_ : (VAL59) (ARG96) [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |automated matches |Streptomyces aureofaciens [TaxId: 1894]
d1srda_ : (ALA1) (LEU47) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Spinach (Spinacia oleracea) [TaxId: 3562]
d1swrb_ : (GLY19) (ASP61) [view usage] : b.61.1.1 |Streptavidin-like |Avidin/streptavidin |Avidin/streptavidin |Streptavidin |Streptomyces avidinii [TaxId: 1895]
d3er7b_ : (GLN62) (PRO119) [view usage] : d.17.4.24 |Cystatin-like |NTF2-like |Exig0174-like |Uncharacterized protein Exig0174 |Exiguobacterium sibiricum 255-15 [TaxId: 262543]
d3gfea_ : (THR7) (ALA40) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |MAP kinase p38 |Human (Homo sapiens) [TaxId: 9606]
d2bw0a1 : (ASP259) (LYS290) [view usage] : b.46.1.1 |FMT C-terminal domain-like |FMT C-terminal domain-like |Post formyltransferase domain |10-formyltetrahydrofolate dehydrogenase domain 2 |Human (Homo sapiens) [TaxId: 9606]
d3hpea_ : (LYS97) (GLY149) [view usage] : b.61.6.0 |Streptavidin-like |YceI-like |automated matches |automated matches |Helicobacter pylori [TaxId: 210]
d1s4ib_ : (HIS43) (ILE87) [view usage] : b.1.8.0 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2jr6a_ : (GLY16) (LEU46) [view usage] : b.171.1.0 |Trm112p-like |Trm112p-like |automated matches |automated matches |Neisseria meningitidis [TaxId: 122587]
d2jzya_ : (THR4) (THR30) [view usage] : a.4.6.0 |DNA/RNA-binding 3-helical bundle |C-terminal effector domain of the bipartite response regulators |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d2avwa_ : (TRP267) (ALA310) [view usage] : d.3.1.12 |Cysteine proteinases |Cysteine proteinases |IgG-specific endopeptidase IdeS (Sib38) |automated matches |Streptococcus pyogenes [TaxId: 293653]
d3itza_ : (THR7) (ALA41) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |MAP kinase p38 |Human (Homo sapiens) [TaxId: 9606]
d1ppqa_ : (SER962) (GLY998) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement receptor 1, cr1 |Human (Homo sapiens) [TaxId: 9606]
d1l3ga_ : (ASN3) (THR37) [view usage] : d.34.1.1 |DNA-binding domain of Mlu1-box binding protein MBP1 |DNA-binding domain of Mlu1-box binding protein MBP1 |DNA-binding domain of Mlu1-box binding protein MBP1 |DNA-binding domain of Mlu1-box binding protein MBP1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4bbod_ : (ASN4) (GLY49) [view usage] : b.61.1.0 |Streptavidin-like |Avidin/streptavidin |automated matches |automated matches |Bradyrhizobium japonicum [TaxId: 375]
d1xtla_ : (HIS43) (ILE87) [view usage] : b.1.8.0 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1buja_ : (SER66) (ARG107) [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Binase |Bacillus intermedius [TaxId: 1400]
d1c9ia2 : (THR109) (PHE142) [view usage] : b.69.6.1 |7-bladed beta-propeller |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1s3ia1 : (GLU259) (LYS290) [view usage] : b.46.1.1 |FMT C-terminal domain-like |FMT C-terminal domain-like |Post formyltransferase domain |10-formyltetrahydrofolate dehydrogenase domain 2 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2aqsa_ : (ALA32) (ILE80) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Neisseria meningitidis [TaxId: 487]
d1xbda_ : (ASN292) (CYS330) [view usage] : b.2.2.1 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family II |Endo-1,4-beta xylanase D, xylan binding domain, XBD |Cellulomonas fimi [TaxId: 1708]
d1xtma_ : (HIS43) (ILE87) [view usage] : b.1.8.0 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1x6mc_ : (LEU87) (HIS126) [view usage] : b.88.1.4 |Mss4-like |Mss4-like |Glutathione-dependent formaldehyde-activating enzyme, Gfa |Glutathione-dependent formaldehyde-activating enzyme, Gfa |Paracoccus denitrificans [TaxId: 266]
d1h54a1 : (LEU719) (ALA752) [view usage] : a.102.1.4 |alpha/alpha toroid |Six-hairpin glycosidases |Glycosyltransferase family 36 C-terminal domain |Lactobacillus maltose phosphorylase, central domain |Lactobacillus brevis [TaxId: 1580]
d2za4a_ : (GLY68) (LYS108) [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
d1kwga1 : (GLY597) (LEU629) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |A4 beta-galactosidase |Thermus thermophilus [TaxId: 274]
d3a0fa1 : (GLY238) (HIS282) [view usage] : b.69.13.0 |7-bladed beta-propeller |Oligoxyloglucan reducing end-specific cellobiohydrolase |automated matches |automated matches |Geotrichum sp. [TaxId: 203496]
d3a0fa1 : (VAL302) (ASP343) [view usage] : b.69.13.0 |7-bladed beta-propeller |Oligoxyloglucan reducing end-specific cellobiohydrolase |automated matches |automated matches |Geotrichum sp. [TaxId: 203496]
d1bpoa2 : (THR109) (PHE142) [view usage] : b.69.6.1 |7-bladed beta-propeller |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2aqqa_ : (ALA32) (ILE80) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Neisseria meningitidis [TaxId: 487]
d3d5ya_ : (ALA273) (LEU313) [view usage] : b.67.2.1 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |alpha-L-arabinanase-like |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
d1j2ea1 : (GLN153) (THR186) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl peptidase IV/CD26, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1j2ea1 : (SER360) (THR398) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl peptidase IV/CD26, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1uzyb_ : (LYS55) (VAL126) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]
d2rbia_ : (GLY67) (ARG107) [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Binase |Bacillus intermedius [TaxId: 1400]
d1s4ia_ : (HIS44) (ILE87) [view usage] : b.1.8.0 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1s18b_ : (PRO25) (TRP77) [view usage] : b.67.3.1 |5-bladed beta-propeller |Apyrase |Apyrase |Soluble calcium-activated nucleotidase SCAN-1 |Human (Homo sapiens) [TaxId: 9606]
d1jofa_ : (LEU254) (SER302) [view usage] : b.69.10.1 |7-bladed beta-propeller |3-carboxy-cis,cis-mucoante lactonizing enzyme |3-carboxy-cis,cis-mucoante lactonizing enzyme |3-carboxy-cis,cis-mucoante lactonizing enzyme |Fungus (Neurospora crassa) [TaxId: 5141]
d2gtlo1 : (HIS174) (LYS222) [view usage] : b.61.7.1 |Streptavidin-like |Extracellular hemoglobin linker subunit, receptor domain |Extracellular hemoglobin linker subunit, receptor domain |Extracellular hemoglobin linker l3 subunit |Common earthworm (Lumbricus terrestris) [TaxId: 6398]
d1gyeb_ : (HIS291) (ASP334) [view usage] : b.67.2.1 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |alpha-L-arabinanase-like |alpha-L-arabinanase |Cellvibrio cellulosa [TaxId: 155077]
d3nssa_ : (GLY408) (GLY461) [view usage] : b.68.1.0 |6-bladed beta-propeller |Sialidases |automated matches |automated matches |Influenza A virus [TaxId: 641501]
d2llaa_ : (GLY1515) (GLY1553) [view usage] : b.64.1.1 |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |automated matches |Australian echidna (Tachyglossus aculeatus) [TaxId: 9261]
d4p8qa1 : (ALA171) (ARG218) [view usage] : b.98.1.0 |Zn aminopeptidase N-terminal domain |Zn aminopeptidase N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.70, b.82, b.19, b.69, b.29, b.67, a.102, d.144, b.40, b.60, d.3, b.2, b.1, d.17, b.26, a.4, b.61, b.109, b.7,
b.88, d.1, b.71, g.18, b.98, b.66, b.64, b.126, d.310, d.34, b.171, b.46