Tableau information
Concept source: d2we2a1 amino acid (a.a.) range (THR32)(SER65)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR32) (PRO38) E1
(THR41) (GLY47) E2
(GLY47) (ARG51) E3
(GLY55) (SER65) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 155.1° E2
E3 -91.3° 71.0° E3
E4 -82.5° 121.9° 147.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2bsya1 : (THR32) (SER65) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Monomeric viral dUTPase |Epstein-Barr virus [TaxId: 10376]
d3tpwa_ : (LEU31) (GLY63) [view usage] : b.85.4.0 |beta-clip |dUTPase-like |automated matches |automated matches |Mason-pfizer monkey virus [TaxId: 11855]
d3ojmb2 : (GLY272) (LYS313) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4kp8d_ : (LYS57) (ALA87) [view usage] : b.74.1.1 |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Carbonic anhydrase |Human (Homo sapiens), isozyme XII [TaxId: 9606]
d1h6fb_ : (THR121) (ASP159) [view usage] : b.2.5.4 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |T-box |T-box protein 3, tbx3 |Human (Homo sapiens) [TaxId: 9606]
d3q5va_ : (TYR56) (ILE91) [view usage] : b.40.5.1 |OB-fold |Inorganic pyrophosphatase |Inorganic pyrophosphatase |automated matches |Thermococcus thioreducens [TaxId: 277988]
d1ekma1 : (ASN455) (LYS506) [view usage] : b.30.2.1 |Supersandwich |Amine oxidase catalytic domain |Amine oxidase catalytic domain |Copper amine oxidase, domain 3 |Yeast (Hansenula polymorpha) [TaxId: 4905]
d1udea_ : (TYR56) (ILE91) [view usage] : b.40.5.1 |OB-fold |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Pyrococcus horikoshii [TaxId: 53953]
d1xbrb_ : (ASN58) (ASP96) [view usage] : b.2.5.4 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |T-box |T domain from Brachyury transcription factor |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1avka1 : (PHE430) (VAL476) [view usage] : b.30.2.1 |Supersandwich |Amine oxidase catalytic domain |Amine oxidase catalytic domain |Copper amine oxidase, domain 3 |Arthrobacter globiformis [TaxId: 1665]
d3i4oa_ : (GLU9) (GLY39) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2we2a1 : (THR32) (SER65) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |automated matches |Human herpesvirus 4 [TaxId: 10377]
d2kwba_ : (PHE18) (ALA45) [view usage] : b.88.1.0 |Mss4-like |Mss4-like |automated matches |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d2ol0a_ : (PRO22) (ASP53) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) |Vaccinia virus [TaxId: 10245]
d3tq4a_ : (LEU31) (GLY63) [view usage] : b.85.4.0 |beta-clip |dUTPase-like |automated matches |automated matches |Mason-pfizer monkey virus [TaxId: 11855]
d3d23b_ : (GLY146) (ASP176) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Human coronavirus [TaxId: 443239]
d1uf3b_ : (THR100) (ALA133) [view usage] : d.159.1.6 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |TT1561-like |Hypothetical protein TT1561 |Thermus thermophilus [TaxId: 274]
d1h6fa_ : (THR121) (ASP159) [view usage] : b.2.5.4 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |T-box |T-box protein 3, tbx3 |Human (Homo sapiens) [TaxId: 9606]
d1cs6a2 : (ASP115) (ASN145) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Axonin-1 |Chicken (Gallus gallus) [TaxId: 9031]
d3s97c1 : (PRO144) (ASN175) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1a6da2 : (GLY326) (MET361) [view usage] : c.8.5.2 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |Group II chaperonin (CCT, TRIC), apical domain |Thermosome, A-domain |Thermoplasma acidophilum, alpha chain [TaxId: 2303]
d1np1a_ : (THR26) (ASP61) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Nitrophorin 1 |Rhodnius prolixus [TaxId: 13249]
d1nunb2 : (GLY272) (LYS313) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fibroblast growth factor receptor, FGFR |Human (Homo sapiens), FGFR2b [TaxId: 9606]
d1xbra_ : (THR57) (ASP96) [view usage] : b.2.5.4 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |T-box |T domain from Brachyury transcription factor |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1hcnb_ : (ALA14) (CYS57) [view usage] : g.17.1.4 |Cystine-knot cytokines |Cystine-knot cytokines |Gonadodropin/Follitropin |Gonadotropin B chain |Human (Homo sapiens) [TaxId: 9606]
d1e5oe_ : (SER178) (GLY212) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Endothiapepsin |Chestnut blight fungus (Endothia parasitica) [TaxId: 5116]
d2bt1a1 : (THR32) (SER65) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Monomeric viral dUTPase |Epstein-Barr virus [TaxId: 10376]
d1ktja_ : (SER1) (GLN45) [view usage] : b.1.18.7 |Immunoglobulin-like beta-sandwich |E set domains |ML domain |Major mite allergen |House-dust mite (Dermatophagoides pteronyssinus), Der p 2 [TaxId: 6956]
d2we0a1 : (THR32) (SER65) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |automated matches |Human herpesvirus 4 [TaxId: 10377]
d4ql5b_ : (ILE7) (GLY38) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |automated matches |Streptococcus pneumoniae [TaxId: 170187]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.159, b.74, b.30, b.47, b.50, b.40, b.60, b.2, b.85, b.1, c.8, b.88, g.17