Tableau information
Concept source: d3ap6b_ amino acid (a.a.) range (GLU84)(HIS128)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU84) (ASP94) E1
(PHE103) (VAL109) E2
(LYS113) (ASN119) E3
(LEU124) (HIS128) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 122.6° E2
E3 -45.3° 161.5° E3
E4 155.0° -33.4° 153.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2vpqb3 : (GLY332) (GLU393) [view usage] : b.84.2.0 |Barrel-sandwich hybrid |Rudiment single hybrid motif |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d1nr0a2 : (ILE573) (PHE611) [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |Actin interacting protein 1 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d3vkma1 : (GLU90) (HIS128) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3bsda_ : (ASP310) (SER341) [view usage] : b.75.1.1 |Bacteriochlorophyll A protein |Bacteriochlorophyll A protein |Bacteriochlorophyll A protein |automated matches |Chlorobaculum tepidum [TaxId: 1097]
d3tqqa2 : (TRP247) (GLN284) [view usage] : b.46.1.0 |FMT C-terminal domain-like |FMT C-terminal domain-like |automated matches |automated matches |Coxiella burnetii [TaxId: 777]
d1s1hd_ : (ASP151) (ASP189) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1c82a3 : (GLN721) (ALA762) [view usage] : b.30.5.2 |Supersandwich |Galactose mutarotase-like |Hyaluronate lyase-like, central domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1bndb_ : (CYS14) (CYS57) [view usage] : g.17.1.3 |Cystine-knot cytokines |Cystine-knot cytokines |Neurotrophin |Neurotrophin 3, NT3 |Human (Homo sapiens) [TaxId: 9606]
d1tc5c_ : (MET9) (ASP47) [view usage] : c.110.1.1 |DTD-like |DTD-like |DTD-like |probable eukaryotic D-amino acid tRNA deacylase |Leishmania major [TaxId: 5664]
d1y4wa1 : (SER464) (SER507) [view usage] : b.29.1.19 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 32 C-terminal domain |Exo-inulinase |Aspergillus awamori [TaxId: 105351]
d2f2fb1 : (ASP60) (ARG125) [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |Cytolethal distending toxin subunit B |Actinobacillus actinomycetemcomitans [TaxId: 714]
d3ouua3 : (GLY332) (ALA392) [view usage] : b.84.2.0 |Barrel-sandwich hybrid |Rudiment single hybrid motif |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d2vpqa3 : (GLY332) (GLU393) [view usage] : b.84.2.0 |Barrel-sandwich hybrid |Rudiment single hybrid motif |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d1ojoa3 : (GLN721) (GLY761) [view usage] : b.30.5.2 |Supersandwich |Galactose mutarotase-like |Hyaluronate lyase-like, central domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d3hkpa_ : (THR130) (THR189) [view usage] : b.3.6.0 |Prealbumin-like |Aromatic compound dioxygenase |automated matches |automated matches |Rhodococcus opacus [TaxId: 37919]
d3ii7a_ : (GLU459) (ILE503) [view usage] : b.68.11.0 |6-bladed beta-propeller |Kelch motif |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wcqa3 : (PRO49) (ASP106) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Micromonospora viridifaciens [TaxId: 1881]
d1egxa_ : (ARG22) (ILE62) [view usage] : b.55.1.4 |PH domain-like barrel |PH domain-like |Enabled/VASP homology 1 domain (EVH1 domain) |Vasodilator-stimulated phosphoprotein (VASP) |Human (Homo sapiens) [TaxId: 9606]
d2e9ia_ : (CYS29) (PHE71) [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |Filamin b |Human (Homo sapiens) [TaxId: 9606]
d1pmhx_ : (SER3) (TRP68) [view usage] : b.18.1.18 |Galactose-binding domain-like |Galactose-binding domain-like |Family 27 carbohydrate binding module, CBM27 |Beta-1,4-mannanase ManA |Caldicellulosiruptor saccharolyticus [TaxId: 44001]
d4b7ma_ : (SER388) (CYS446) [view usage] : b.68.1.0 |6-bladed beta-propeller |Sialidases |automated matches |automated matches |Influenza a virus (a/netherlands/2631/2010(h1n1)) [TaxId: 1027873]
d2d43a1 : (GLY231) (TYR271) [view usage] : b.29.1.21 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Alpha-L-arabinofuranosidase B, N-terminal domain |automated matches |Aspergillus kawachii [TaxId: 40384]
d2exha1 : (VAL442) (PRO487) [view usage] : b.29.1.23 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Beta-D-xylosidase C-terminal domain-like |Beta-D-xylosidase C-terminal domain |Geobacillus stearothermophilus [TaxId: 1422]
d1pmjx_ : (ASN5) (TRP68) [view usage] : b.18.1.18 |Galactose-binding domain-like |Galactose-binding domain-like |Family 27 carbohydrate binding module, CBM27 |Beta-1,4-mannanase ManA |Caldicellulosiruptor saccharolyticus [TaxId: 44001]
d2wnxa_ : (ASP47) (SER97) [view usage] : b.2.2.0 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |automated matches |automated matches |Clostridium thermocellum [TaxId: 1515]
d2bzdc1 : (PRO49) (ASP106) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Micromonospora viridifaciens [TaxId: 1881]
d1gosa2 : (PRO290) (ALA346) [view usage] : d.16.1.5 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |L-aminoacid/polyamine oxidase |Monoamine oxidase B |Human (Homo sapiens) [TaxId: 9606]
d1s18b_ : (GLY82) (GLY122) [view usage] : b.67.3.1 |5-bladed beta-propeller |Apyrase |Apyrase |Soluble calcium-activated nucleotidase SCAN-1 |Human (Homo sapiens) [TaxId: 9606]
d1aqba_ : (GLY59) (ASP102) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Retinol binding protein |Pig (Sus scrofa) [TaxId: 9823]
d3o32b_ : (ARG103) (HIS162) [view usage] : b.3.6.1 |Prealbumin-like |Aromatic compound dioxygenase |Aromatic compound dioxygenase |Chlorocatechol 1,2-dioxygenase |Rhodococcus opacus [TaxId: 37919]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.69, i.1, b.29, b.67, b.30, d.151, b.60, b.18, b.2, b.1, b.84, b.55, c.110, b.3, d.16, g.17, b.75, b.46