Tableau information
Concept source: d3mtfa_ amino acid (a.a.) range (ALA331)(SER364)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA331) (ASP336) E1
(ILE342) (LYS346) E2
(GLN349) (LEU355) E3
(ALA358) (SER364) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 92.8° E2
E3 87.8° 143.4° E3
E4 168.3° -96.3° -89.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3s97a_ : (LEU80) (GLY114) [view usage] : b.74.1.0 |Carbonic anhydrase |Carbonic anhydrase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2hz0a_ : (ASN358) (GLY390) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Abelsone tyrosine kinase (abl) |Human (Homo sapiens) [TaxId: 9606]
d2yy4a_ : (HIS134) (THR175) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |SARS coronavirus [TaxId: 227859]
d3r7ka1 : (LEU204) (PRO240) [view usage] : e.6.1.0 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
d2biya_ : (GLY200) (SER231) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1iasa_ : (GLN324) (ASP359) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Type I TGF-beta receptor R4 |Human (Homo sapiens) [TaxId: 9606]
d3jxfb_ : (LYS79) (GLY114) [view usage] : b.74.1.0 |Carbonic anhydrase |Carbonic anhydrase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1duda_ : (ALA29) (ALA60) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) |Escherichia coli [TaxId: 562]
d1zunb2 : (PRO363) (ASP399) [view usage] : b.44.1.1 |Elongation factor/aminomethyltransferase common domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain |Sulfate adenylate transferase subunit cysN/C, EF-Tu domain 3-like domain |Pseudomonas syringae pv. tomato [TaxId: 323]
d3qyia_ : (ASN142) (ALA172) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |MAP kinase Erk2 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4fvra_ : (LEU545) (GLU566) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1uxxx_ : (ASN13) (ASN44) [view usage] : b.18.1.10 |Galactose-binding domain-like |Galactose-binding domain-like |Family 6 carbohydrate binding module, CBM6 |Carbohydrate binding module from xylanase U |Clostridium thermocellum [TaxId: 1515]
d3of6b2 : (ARG208) (ASP247) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4maea_ : (GLY373) (GLU416) [view usage] : b.70.1.0 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |automated matches |automated matches |Methylacidiphilum fumariolicum [TaxId: 1156937]
d1x3eb_ : (VAL77) (PRO108) [view usage] : b.40.4.3 |OB-fold |Nucleic acid-binding proteins |Single strand DNA-binding domain, SSB |automated matches |Mycobacterium smegmatis [TaxId: 1772]
d3s97b_ : (LEU80) (GLY114) [view usage] : b.74.1.0 |Carbonic anhydrase |Carbonic anhydrase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3oj2c1 : (ALA153) (ASN184) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ii1c_ : (LEU79) (MSE130) [view usage] : b.23.3.0 |CUB-like |Acetamidase/Formamidase-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
d4v19v_ : (VAL158) (CYS207) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, mitochondrial (54S or 39S subunit) |Pig (Sus scrofa) [TaxId: 9823]
d2bh2b1 : (GLN47) (SER71) [view usage] : b.40.4.12 |OB-fold |Nucleic acid-binding proteins |TRAM domain |rRNA (Uracil-5-)-methyltransferase RumA, N-terminal domain |Escherichia coli [TaxId: 562]
d4o0ta_ : (GLN384) (THR415) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4iv6a1 : (SER181) (PRO218) [view usage] : e.6.1.0 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d1asya1 : (VAL166) (THR196) [view usage] : b.40.4.1 |OB-fold |Nucleic acid-binding proteins |Anticodon-binding domain |Aspartyl-tRNA synthetase (AspRS) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1p35a_ : (ASN176) (GLU208) [view usage] : b.28.1.1 |Baculovirus p35 protein |Baculovirus p35 protein |Baculovirus p35 protein |Baculovirus p35 protein |AcMNPV (Autographa californica nuclear polyhedrosis virus) [TaxId: 46015]
d4f49a_ : (GLY133) (SER174) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Porcine transmissible gastroenteritis coronavirus [TaxId: 11151]
d3pepa_ : (GLY78) (GLY109) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Pepsin(ogen) |Pig (Sus scrofa) [TaxId: 9823]
d2qr7a_ : (GLY534) (ALA570) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1k5db_ : (ASN101) (ALA129) [view usage] : b.55.1.3 |PH domain-like barrel |PH domain-like |Ran-binding domain |Ran-binding protein 1, Ranbp1 |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.70, i.1, b.74, b.47, b.50, d.144, b.40, e.6, b.18, b.85, b.1, b.55, b.23, b.44, b.28