Tableau information
Concept source: d1i8fb_ amino acid (a.a.) range (LEU47)(ARG69)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU47) (ASP51) E1
(ASP51) (ILE56) E2
(ASN59) (GLY64) E3
(GLY64) (ARG69) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -95.9° E2
E3 -102.5° 152.8° E3
E4 167.0° 71.4° 90.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2q2ha_ : (VAL67) (PHE90) [view usage] : b.40.4.0 |OB-fold |Nucleic acid-binding proteins |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d2pf5d_ : (GLY43) (ASN94) [view usage] : d.169.1.4 |C-type lectin-like |C-type lectin-like |Link domain |TSG-6, Link module |Human (Homo sapiens) [TaxId: 9606]
d1wdja_ : (GLY66) (GLU91) [view usage] : c.52.1.27 |Restriction endonuclease-like |Restriction endonuclease-like |Hypothetical protein TT1808 (TTHA1514) |Hypothetical protein TT1808 (TTHA1514) |Thermus thermophilus [TaxId: 274]
d3oe2a_ : (GLY141) (ARG167) [view usage] : d.26.1.0 |FKBP-like |FKBP-like |automated matches |automated matches |Pseudomonas syringae [TaxId: 223283]
d3bdoa_ : (GLY80) (GLU156) [view usage] : b.84.1.1 |Barrel-sandwich hybrid |Single hybrid motif |Biotinyl/lipoyl-carrier proteins and domains |Biotinyl domain of acetyl-CoA carboxylase |Escherichia coli [TaxId: 562]
d3c9xa_ : (THR63) (GLY92) [view usage] : b.50.1.0 |Acid proteases |Acid proteases |automated matches |automated matches |Trichoderma reesei [TaxId: 51453]
d1ibzc_ : (PHE4) (GLU36) [view usage] : b.6.1.4 |Cupredoxin-like |Cupredoxins |Nitrosocyanin |Red copper protein nitrosocyanin |Nitrosomonas europaea [TaxId: 915]
d1hf2b1 : (PHE123) (GLY146) [view usage] : b.80.3.1 |Single-stranded right-handed beta-helix |Cell-division inhibitor MinC, C-terminal domain |Cell-division inhibitor MinC, C-terminal domain |Cell-division inhibitor MinC, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d1po3a_ : (ALA550) (GLY595) [view usage] : f.4.3.3 |Transmembrane beta-barrels |Porins |Ligand-gated protein channel |Outer membrane transporter FecA |Escherichia coli [TaxId: 562]
d1o7bt_ : (GLY43) (ASN94) [view usage] : d.169.1.4 |C-type lectin-like |C-type lectin-like |Link domain |TSG-6, Link module |Human (Homo sapiens) [TaxId: 9606]
d3ah6c_ : (ALA38) (LEU66) [view usage] : d.58.5.2 |Ferredoxin-like |GlnB-like |Divalent ion tolerance proteins CutA (CutA1) |Cut A1 |Escherichia coli [TaxId: 562]
d2dj6b_ : (MET1) (GLU38) [view usage] : d.96.1.0 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d4a17j_ : (ILE83) (ALA107) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
d1shga_ : (GLU7) (ASP62) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |alpha-Spectrin, SH3 domain |Chicken (Gallus gallus) [TaxId: 9031]
d2vmga1 : (GLU51) (HIS82) [view usage] : b.18.1.33 |Galactose-binding domain-like |Galactose-binding domain-like |NPCBM-like |Uncharacterized Protein CPF2129 |Clostridium perfringens [TaxId: 1502]
d4c92e_ : (VAL41) (SER74) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ivta_ : (GLU460) (LYS490) [view usage] : b.1.16.1 |Immunoglobulin-like beta-sandwich |Lamin A/C globular tail domain |Lamin A/C globular tail domain |Lamin A/C globular tail domain |Human (Homo sapiens) [TaxId: 9606]
d1ibya_ : (PHE4) (GLU36) [view usage] : b.6.1.4 |Cupredoxin-like |Cupredoxins |Nitrosocyanin |Red copper protein nitrosocyanin |Nitrosomonas europaea [TaxId: 915]
d2quyf_ : (VAL29) (GLY56) [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Bacillus sphaericus [TaxId: 1421]
d1zsob_ : (ASN41) (THR66) [view usage] : b.166.1.1 |MAL13P1.257-like |MAL13P1.257-like |MAL13P1.257-like |Hypothetical protein MAL13P1.257 |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d1zsoa1 : (ASN41) (THR66) [view usage] : b.166.1.1 |MAL13P1.257-like |MAL13P1.257-like |MAL13P1.257-like |Hypothetical protein MAL13P1.257 |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d1m3aa_ : (CYS135) (ARG162) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |C-Crk, N-terminal SH3 domain |Mouse (Mus musculus) [TaxId: 10090]
d3swnd_ : (ILE42) (GLY67) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Schizosaccharomyces pombe [TaxId: 284812]
d1kmpa_ : (ALA550) (ARG591) [view usage] : f.4.3.3 |Transmembrane beta-barrels |Porins |Ligand-gated protein channel |Outer membrane transporter FecA |Escherichia coli [TaxId: 562]
d2gqfa2 : (GLY213) (HIS236) [view usage] : e.74.1.1 |HI0933 insert domain-like |HI0933 insert domain-like |HI0933 insert domain-like |Hypothetical protein HI0933 |Haemophilus influenzae [TaxId: 727]
d4f7uf_ : (MET4042) (ARG4065) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |African clawed frog (Xenopus laevis) [TaxId: 8355]
d4ohcd_ : (ALA22) (ASP44) [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d1hf2a1 : (PHE123) (GLY146) [view usage] : b.80.3.1 |Single-stranded right-handed beta-helix |Cell-division inhibitor MinC, C-terminal domain |Cell-division inhibitor MinC, C-terminal domain |Cell-division inhibitor MinC, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d2quya_ : (VAL29) (GLY56) [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Bacillus sphaericus [TaxId: 1421]
d2qeqb2 : (THR572) (ARG595) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |West nile virus [TaxId: 11078]
d1i9ra_ : (ILE122) (ARG165) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Extracellular domain of CD40 ligand |Human (Homo sapiens) [TaxId: 9606]
d1na6b2 : (HIS285) (PRO303) [view usage] : c.52.1.22 |Restriction endonuclease-like |Restriction endonuclease-like |Type II restriction endonuclease catalytic domain |Restriction endonuclease EcoRII, C-terminal domain |Escherichia coli [TaxId: 562]
d1ibza_ : (PHE4) (GLU36) [view usage] : b.6.1.4 |Cupredoxin-like |Cupredoxins |Nitrosocyanin |Red copper protein nitrosocyanin |Nitrosomonas europaea [TaxId: 915]
d2ewna3 : (ASP105) (GLU140) [view usage] : d.104.1.2 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Biotin holoenzyme synthetase |Biotin repressor/biotin holoenzyme synthetase, catalytic (central) domain |Escherichia coli [TaxId: 562]
d2q2ia_ : (VAL67) (PHE90) [view usage] : b.40.4.0 |OB-fold |Nucleic acid-binding proteins |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d1fyca_ : (GLY34) (LEU63) [view usage] : b.84.1.1 |Barrel-sandwich hybrid |Single hybrid motif |Biotinyl/lipoyl-carrier proteins and domains |Lipoyl domain of dihydrolipoamide acetyltransferase |Human (Homo sapiens) [TaxId: 9606]
d2b5ua2 : (ALA177) (GLU215) [view usage] : b.110.1.1 |Cloacin translocation domain |Cloacin translocation domain |Cloacin translocation domain |Colicin E3 N-terminal domain |Escherichia coli [TaxId: 562]
d3u5ev_ : (VAL79) (ALA103) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, d.58, i.1, b.50, f.4, b.40, c.37, d.104, d.153, b.18, d.169, d.96, b.6, b.1, b.84, c.61, c.52, b.22, b.34, b.38,
d.26, b.110, b.166, e.74