Tableau information
Concept source: d4a8ua_ amino acid (a.a.) range (LYS65)(ALA106)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS65) (VAL71) E1
(ASP72) (HIS76) E2
(PHE79) (GLU87) E3
(GLU96) (ALA106) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -60.5° E2
E3 136.2° -158.4° E3
E4 -61.4° 9.8° 161.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1q7ra_ : (GLY144) (SER167) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |Hypothetical protein YaaE |Bacillus stearothermophilus [TaxId: 1422]
d2gcxa1 : (SER35) (ARG61) [view usage] : b.34.1.2 |SH3-like barrel |C-terminal domain of transcriptional repressors |FeoA-like |Ferrous iron transport protein A, FeoA |Klebsiella pneumoniae [TaxId: 573]
d1g6q1_ : (GLN286) (GLY331) [view usage] : c.66.1.6 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Arginine methyltransferase |Arginine methyltransferase, HMT1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4h69e_ : (GLY98) (GLN134) [view usage] : b.159.1.0 |AOC barrel-like |Allene oxide cyclase-like |automated matches |automated matches |Physcomitrella patens [TaxId: 145481]
d2pzha_ : (LEU66) (PHE111) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
d2ldka_ : (PRO47) (THR80) [view usage] : d.129.3.0 |TBP-like |Bet v1-like |automated matches |automated matches |Arthrobacter aurescens [TaxId: 290340]
d3vyra_ : (ALA4) (GLU27) [view usage] : b.40.14.1 |OB-fold |HupF/HypC-like |HupF/HypC-like |Hydrogenase expression/formation protein HypC |Thermococcus kodakaraensis [TaxId: 311400]
d1x53a1 : (ASN60) (ILE96) [view usage] : d.129.3.5 |TBP-like |Bet v1-like |AHSA1 domain |Activator of 90 kda heat shock protein ATPase homolog 1, AHSA1 |Human (Homo sapiens) [TaxId: 9606]
d1lo7a_ : (ASP75) (ILE116) [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |4-hydroxybenzoyl-CoA thioesterase |Pseudomonas sp., CBS-3 [TaxId: 306]
d3btaa1 : (ASN958) (THR989) [view usage] : b.29.1.6 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Clostridium neurotoxins, the second last domain |Botulinum neurotoxin |Clostridium botulinum, serotype A [TaxId: 1491]
d1c1aa1 : (GLY236) (TRP259) [view usage] : b.34.7.1 |SH3-like barrel |DNA-binding domain of retroviral integrase |DNA-binding domain of retroviral integrase |DNA-binding domain of retroviral integrase |Rous sarcoma virus RSV [TaxId: 11886]
d1mh6a_ : (GLY225) (ALA249) [view usage] : d.32.1.2 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Antibiotic resistance proteins |Bleomycin resistance protein, BRP |Klebsiella pneumoniae [TaxId: 573]
d2nv2l_ : (ASN145) (SER168) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |automated matches |Bacillus subtilis [TaxId: 1423]
d1h54a2 : (PHE186) (LEU223) [view usage] : b.30.5.3 |Supersandwich |Galactose mutarotase-like |Glycosyltransferase family 36 N-terminal domain |Lactobacillus maltose phosphorylase, N-terminal domain |Lactobacillus brevis [TaxId: 1580]
d2moua_ : (GLY23) (ILE53) [view usage] : d.129.3.0 |TBP-like |Bet v1-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3kupb_ : (GLU124) (LEU150) [view usage] : b.34.13.2 |SH3-like barrel |Chromo domain-like |Chromo domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2hqxa1 : (ARG50) (VAL74) [view usage] : b.34.9.1 |SH3-like barrel |Tudor/PWWP/MBT |Tudor domain |P100 co-activator, SND1 |Human (Homo sapiens) [TaxId: 9606]
d2arza1 : (ALA189) (PRO212) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Hypothetical protein PA4388 |Pseudomonas aeruginosa [TaxId: 287]
d2kewa_ : (PRO62) (GLU90) [view usage] : d.129.3.5 |TBP-like |Bet v1-like |AHSA1 domain |automated matches |Bacillus subtilis [TaxId: 224308]
d2a6ya1 : (SER17) (THR47) [view usage] : b.29.1.13 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Lectin leg-like |Emp47p N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1f2ka_ : (THR1065) (SER1092) [view usage] : d.110.1.1 |Profilin-like |Profilin (actin-binding protein) |Profilin (actin-binding protein) |Profilin (actin-binding protein) |Acanthamoeba castellanii [TaxId: 5755]
d1dppa_ : (PRO184) (ILE218) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Dipeptide-binding protein |Escherichia coli [TaxId: 562]
d1cyga3 : (ASP404) (VAL430) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Cyclodextrin glycosyltransferase |Bacillus stearothermophilus [TaxId: 1422]
d1djna2 : (ASP591) (ASP636) [view usage] : c.3.1.1 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |C-terminal domain of adrenodoxin reductase-like |Trimethylamine dehydrogenase, C-terminal domain |Methylophilus methylotrophus, w3a1 [TaxId: 17]
d2z1ca1 : (VAL5) (GLU27) [view usage] : b.40.14.1 |OB-fold |HupF/HypC-like |HupF/HypC-like |Hydrogenase expression/formation protein HypC |Thermococcus kodakaraensis [TaxId: 311400]
d1t17a_ : (THR35) (ASP73) [view usage] : d.129.3.6 |TBP-like |Bet v1-like |oligoketide cyclase/dehydrase-like |Hypothetical protein CC1736 |Caulobacter crescentus [TaxId: 155892]
d1g6q2_ : (GLN286) (GLY331) [view usage] : c.66.1.6 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Arginine methyltransferase |Arginine methyltransferase, HMT1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1rhfa2 : (VAL98) (TRP133) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Tyrosine-protein kinase receptor tyro3, second domain |Human (Homo sapiens) [TaxId: 9606]
d1ecsa_ : (GLY25) (ALA49) [view usage] : d.32.1.2 |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |Antibiotic resistance proteins |Bleomycin resistance protein, BRP |Klebsiella pneumoniae [TaxId: 573]
d1j2ba2 : (MET7) (GLU32) [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Archaeosine tRNA-guanine transglycosylase, N-terminal domain |Pyrococcus horikoshii [TaxId: 53953]
d2nv2f_ : (ASN145) (SER168) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |automated matches |Bacillus subtilis [TaxId: 1423]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.94, b.29, b.30, c.66, d.129, c.23, b.40, d.32, b.1, b.45, d.110, d.38, b.34, c.3, b.71, b.159