Tableau information
Concept source: d2jj6b_ amino acid (a.a.) range (ALA47)(LEU92)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA47) (ALA52) E1
(ARG57) (SER66) E2
(GLY67) (PRO77) E3
(PRO86) (LEU92) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 157.7° E2
E3 -45.8° 156.5° E3
E4 156.7° -39.0° 120.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1wgva_ : (VAL47) (PRO89) [view usage] : b.15.1.4 |HSP20-like chaperones |HSP20-like chaperones |Nuclear movement domain |NudC domain containing protein 3, NUDCD3 (KIAA1068) |Human (Homo sapiens) [TaxId: 9606]
d2b5la4 : (GLN466) (SER505) [view usage] : b.69.4.3 |7-bladed beta-propeller |WD40 repeat-like |DDB1-like |DDB1 |Human (Homo sapiens) [TaxId: 9606]
d1wkta_ : (GLY45) (ARG86) [view usage] : b.11.1.2 |gamma-Crystallin-like |gamma-Crystallin-like |Yeast killer toxin |Yeast killer toxin |Williopsis mrakii [TaxId: 4963]
d2vokb_ : (CYS132) (GLY176) [view usage] : b.29.1.22 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |SPRY domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1we3o_ : (LYS5) (ASP83) [view usage] : b.35.1.1 |GroES-like |GroES-like |GroES |Chaperonin-10 (GroES) |Thermus thermophilus [TaxId: 274]
d4l7dc_ : (ILE328) (VAL369) [view usage] : b.68.11.1 |6-bladed beta-propeller |Kelch motif |Kelch motif |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1uwva1 : (THR18) (GLU51) [view usage] : b.40.4.12 |OB-fold |Nucleic acid-binding proteins |TRAM domain |rRNA (Uracil-5-)-methyltransferase RumA, N-terminal domain |Escherichia coli [TaxId: 562]
d3adea_ : (GLY325) (VAL369) [view usage] : b.68.11.1 |6-bladed beta-propeller |Kelch motif |Kelch motif |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1fx0a2 : (GLU52) (GLY93) [view usage] : b.49.1.1 |Domain of alpha and beta subunits of F1 ATP synthase-like |N-terminal domain of alpha and beta subunits of F1 ATP synthase |N-terminal domain of alpha and beta subunits of F1 ATP synthase |F1 ATP synthase alpha subunit, domain 1 |Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]
d3kyga1 : (GLU101) (SER133) [view usage] : b.45.2.2 |Split barrel-like |PilZ domain-like |PilZ domain-associated domain |automated matches |Vibrio cholerae [TaxId: 666]
d1mlba1 : (ASP1) (ASN31) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 4 [TaxId: 10090]
d3k2za2 : (ASN73) (PRO100) [view usage] : b.87.1.0 |LexA/Signal peptidase |LexA/Signal peptidase |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d1v2ia_ : (LYS418) (ASN485) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Hemagglutinin-neuraminidase glycoprotein |Human parainfluenza virus type 3 [TaxId: 11216]
d1we3p_ : (VAL7) (ASP83) [view usage] : b.35.1.1 |GroES-like |GroES-like |GroES |Chaperonin-10 (GroES) |Thermus thermophilus [TaxId: 274]
d4l7ba_ : (ILE328) (VAL369) [view usage] : b.68.11.1 |6-bladed beta-propeller |Kelch motif |Kelch motif |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1w99a2 : (LYS322) (ASN375) [view usage] : b.77.2.1 |beta-Prism I |delta-Endotoxin (insectocide), middle domain |delta-Endotoxin (insectocide), middle domain |delta-Endotoxin (insectocide), middle domain |Bacillus thuringiensis, Cry4Ba [TaxId: 1428]
d3vzja_ : (GLY96) (PHE146) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus circulans [TaxId: 1397]
d2vh5l_ : (ILE4) (SER33) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3g7ea_ : (GLN128) (TRP170) [view usage] : d.122.1.2 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |DNA gyrase/MutL, N-terminal domain |automated matches |Escherichia coli [TaxId: 562]
d3r2ia1 : (LYS63) (GLY100) [view usage] : b.40.2.0 |OB-fold |Bacterial enterotoxins |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d1nxza1 : (ASN47) (ASP73) [view usage] : b.122.1.2 |PUA domain-like |PUA domain-like |YggJ N-terminal domain-like |Hypothetical protein HI0303 |Haemophilus influenzae [TaxId: 727]
d1ag4a_ : (THR57) (THR99) [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |Spherulin 3a (S3a) |Slime mold (Physarum polycephalum) [TaxId: 5791]
d3chpa2 : (GLU165) (GLY207) [view usage] : b.98.1.1 |Zn aminopeptidase N-terminal domain |Zn aminopeptidase N-terminal domain |Zn aminopeptidase N-terminal domain |Leukotriene A4 hydrolase N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2vpja_ : (ALA279) (SER326) [view usage] : b.68.11.0 |6-bladed beta-propeller |Kelch motif |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1a3wa1 : (ARG141) (GLY183) [view usage] : b.58.1.1 |PK beta-barrel domain-like |PK beta-barrel domain-like |Pyruvate kinase beta-barrel domain |Pyruvate kinase (PK) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3zo0b_ : (CYS126) (GLY170) [view usage] : b.29.1.22 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |SPRY domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1qg3a1 : (ASP1126) (GLY1156) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Integrin beta-4 subunit |Human (Homo sapiens) [TaxId: 9606]
d4iaua_ : (GLY85) (SER119) [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Geodia cydonium [TaxId: 6047]
d4no4a_ : (CYS43) (PHE92) [view usage] : b.29.1.3 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Galectin (animal S-lectin) |Galectin-1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3qk3b_ : (PRO112) (SER150) [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4l7ca_ : (ILE328) (VAL369) [view usage] : b.68.11.1 |6-bladed beta-propeller |Kelch motif |Kelch motif |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1v1pa2 : (ILE169) (ASN209) [view usage] : d.15.6.1 |beta-Grasp (ubiquitin-like) |Superantigen toxins, C-terminal domain |Superantigen toxins, C-terminal domain |Exotoxin 1 (SET1, Superantigen-like protein 7) |Staphylococcus aureus [TaxId: 1280]
d1f3vb1 : (PRO425) (ASP497) [view usage] : b.8.1.1 |TRAF domain-like |TRAF domain-like |MATH domain |TNF receptor associated factor 2 (TRAF2) |Human (Homo sapiens) [TaxId: 9606]
d2gtya1 : (SER19) (SER54) [view usage] : b.77.3.1 |beta-Prism I |Mannose-binding lectins |Mannose-binding lectins |Griffithsin |Red alga (Griffithsia) [TaxId: 35158]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.69, b.29, d.122, b.40, b.122, b.1, b.45, b.77, b.11, d.15, b.87, b.15, b.49, b.98, b.58, b.8, b.35