Tableau information
Concept source: d4ahca1 amino acid (a.a.) range (ILE54)(GLU88)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ILE54) (HIS59) E1
(LYS61) (ILE65) E2
(VAL66) (LYS70) E3
(VAL82) (GLU88) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 147.5° E2
E3 143.2° -21.0° E3
E4 -32.2° 148.0° 165.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ep3a_ : (GLY43) (ALA73) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Dihydroorotate dehydrogenase |Lactococcus lactis, isozyme B [TaxId: 1358]
d2y3na_ : (ALA114) (PRO172) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |automated matches |Bacteroides cellulosolvens [TaxId: 35825]
d1a66a_ : (GLN5) (GLY52) [view usage] : b.2.5.3 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |Rel/Dorsal transcription factors, DNA-binding domain |T-cell transcription factor NFAT1 (NFATC), DNA-binding domain |Human (Homo sapiens) [TaxId: 9606]
d1aohb_ : (PHE101) (GLY147) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cohesin domain |Clostridium thermocellum, cellulosome, various modules [TaxId: 1515]
d2gtln1 : (ASN109) (LEU155) [view usage] : b.61.7.1 |Streptavidin-like |Extracellular hemoglobin linker subunit, receptor domain |Extracellular hemoglobin linker subunit, receptor domain |Extracellular hemoglobin linker l2 subunit |Common earthworm (Lumbricus terrestris) [TaxId: 6398]
d1ep1a_ : (GLY43) (ALA73) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Dihydroorotate dehydrogenase |Lactococcus lactis, isozyme B [TaxId: 1358]
d1ytub1 : (GLY313) (SER352) [view usage] : c.55.3.10 |Ribonuclease H-like motif |Ribonuclease H-like |PIWI domain |Hypothetical protein AF1318 |Archaeoglobus fulgidus [TaxId: 2234]
d4gu7a_ : (SER230) (ALA264) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Streptomyces coelicolor [TaxId: 100226]
d1ds6b_ : (LYS124) (THR157) [view usage] : b.1.18.8 |Immunoglobulin-like beta-sandwich |E set domains |RhoGDI-like |Rho GDP-dissociation inhibitor 1, RhoGDI |Human (Homo sapiens) [TaxId: 9606]
d3snma_ : (ALA177) (PHE213) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Canavalia lineata [TaxId: 28957]
d2ce6a1 : (ASN27) (ARG67) [view usage] : b.154.1.1 |HPA-like |Agglutinin HPA-like |Agglutinin HPA-like |Agglutinin HPA |Roman snail (Helix pomatia) [TaxId: 6536]
d4q7ga_ : (GLY245) (ASN291) [view usage] : f.6.1.1 |Leukocidin-like |Leukocidin-like |Leukocidin (pore-forming toxin) |automated matches |Staphylococcus aureus [TaxId: 282459]
d1fl5a1 : (SER26) (ILE48) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]
d2jh2b_ : (LEU95) (GLU139) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |automated matches |Clostridium perfringens [TaxId: 1502]
d3le2a_ : (TYR211) (PRO241) [view usage] : e.1.1.0 |Serpins |Serpins |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d4lveb_ : (SER326) (ILE348) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Human (Homo sapiens), cluster 2 [TaxId: 9606]
d3b07a_ : (SER220) (ASN266) [view usage] : f.6.1.1 |Leukocidin-like |Leukocidin-like |Leukocidin (pore-forming toxin) |automated matches |Staphylococcus aureus [TaxId: 158878]
d2oulb_ : (ALA12) (PHE73) [view usage] : b.1.26.1 |Immunoglobulin-like beta-sandwich |ICP-like |ICP-like |Chagasin |Trypanosoma cruzi [TaxId: 5693]
d1ek3a_ : (SER26) (TRP50) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Human (Homo sapiens), cluster 2 [TaxId: 9606]
d2nnra_ : (ALA12) (PHE73) [view usage] : b.1.26.1 |Immunoglobulin-like beta-sandwich |ICP-like |ICP-like |Chagasin |Trypanosoma cruzi [TaxId: 5693]
d2cgya_ : (ASN34) (ARG67) [view usage] : b.154.1.1 |HPA-like |Agglutinin HPA-like |Agglutinin HPA-like |automated matches |Roman snail (Helix pomatia) [TaxId: 6536]
d3ghpb_ : (ALA121) (PRO169) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cellulosomal scaffoldin adaptor protein B, ScaB |Acetivibrio cellulolyticus [TaxId: 35830]
d3o4sa_ : (GLU190) (GLN220) [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4ahca1 : (ILE54) (GLU88) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Pyrococcus furiosus [TaxId: 2261]
d1ifra_ : (HIS434) (ASN456) [view usage] : b.1.16.1 |Immunoglobulin-like beta-sandwich |Lamin A/C globular tail domain |Lamin A/C globular tail domain |Lamin A/C globular tail domain |Human (Homo sapiens) [TaxId: 9606]
d2b59a1 : (ALA130) (ASP178) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Scaffolding dockerin binding protein A, SdbA |Clostridium thermocellum [TaxId: 1515]
d1ddta1 : (GLY482) (SER535) [view usage] : b.2.1.1 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Diphtheria toxin, C-terminal domain |Diphtheria toxin, C-terminal domain |Diphtheria toxin, C-terminal domain |Corynebacterium diphtheriae [TaxId: 1717]
d2m5ta_ : (PHE6) (GLY39) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Rhinovirus c [TaxId: 463676]
d2ygta_ : (GLY222) (ASN265) [view usage] : f.6.1.0 |Leukocidin-like |Leukocidin-like |automated matches |automated matches |Clostridium perfringens [TaxId: 1502]
d1r17a2 : (GLN425) (ASN456) [view usage] : b.2.3.4 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Fibrinogen-binding domain |Fibrinogen-binding adhesin SdrG |Staphylococcus epidermidis [TaxId: 1282]
d2hrva_ : (TYR6) (TYR39) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |2A cysteine proteinase |Human rhinovirus 2 [TaxId: 12130]
d1hkqa_ : (ARG78) (GLY110) [view usage] : a.4.5.10 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Replication initiation protein |Replication protein A, repA |Pseudomonas syringae pv. savastanoi [TaxId: 29438]
d2fcpa_ : (SER513) (ALA548) [view usage] : f.4.3.3 |Transmembrane beta-barrels |Porins |Ligand-gated protein channel |Ferric hydroxamate uptake receptor FhuA |Escherichia coli [TaxId: 562]
d3f2la_ : (ALA114) (ASN166) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |automated matches |Acetivibrio cellulolyticus [TaxId: 35830]
d2jh2a1 : (LEU95) (GLU139) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |O-GlcNAcase NagJ |Clostridium perfringens [TaxId: 1502]
d4jc5a_ : (PRO225) (PRO263) [view usage] : d.387.1.1 |STING C-terminal-like |STING, TM173 CTD-like |Tyrosinase cofactor MelC1 |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2nnza_ : (ILE41) (PHE88) [view usage] : b.62.1.0 |Cyclophilin-like |Cyclophilin-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 224325]
d2rala2 : (GLN425) (ASN456) [view usage] : b.2.3.4 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Fibrinogen-binding domain |Fibrinogen-binding adhesin SdrG |Staphylococcus epidermidis [TaxId: 1282]
d1xhkb_ : (ILE566) (GLY588) [view usage] : d.14.1.10 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |ATP-dependent protease Lon (La), catalytic domain |ATP-dependent protease Lon (La), catalytic domain |Methanococcus jannaschii [TaxId: 2190]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, d.58, b.29, b.47, c.45, f.4, c.55, d.14, b.2, b.1, b.62, e.1, a.4, b.61, f.6, d.387, b.154