Tableau information
Concept source: d4efvb_ amino acid (a.a.) range (TRP76)(LYS114)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TRP76) (PHE86) E1
(LEU90) (GLY94) E2
(ARG100) (ASP105) E3
(VAL109) (LYS114) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -95.3° E2
E3 151.5° 106.4° E3
E4 140.3° -65.5° -67.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4gvja_ : (HIS1018) (GLU1050) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1sgfy_ : (ASN77) (ARG114) [view usage] : g.17.1.3 |Cystine-knot cytokines |Cystine-knot cytokines |Neurotrophin |beta-Nerve growth factor |Mouse (Mus musculus) [TaxId: 10090]
d1btgb_ : (THR81) (ARG114) [view usage] : g.17.1.3 |Cystine-knot cytokines |Cystine-knot cytokines |Neurotrophin |beta-Nerve growth factor |Mouse (Mus musculus) [TaxId: 10090]
d4ec7a_ : (TRP74) (LYS112) [view usage] : g.17.1.3 |Cystine-knot cytokines |Cystine-knot cytokines |Neurotrophin |automated matches |Chinese cobra (Naja atra) [TaxId: 8656]
d1bndb_ : (HIS74) (ARG114) [view usage] : g.17.1.3 |Cystine-knot cytokines |Cystine-knot cytokines |Neurotrophin |Neurotrophin 3, NT3 |Human (Homo sapiens) [TaxId: 9606]
d4efvb_ : (TRP76) (LYS114) [view usage] : g.17.1.3 |Cystine-knot cytokines |Cystine-knot cytokines |Neurotrophin |automated matches |Llama (Lama glama) [TaxId: 9844]
d3buka_ : (LYS80) (ARG114) [view usage] : g.17.1.3 |Cystine-knot cytokines |Cystine-knot cytokines |Neurotrophin |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nt3a_ : (TRP75) (LYS115) [view usage] : g.17.1.3 |Cystine-knot cytokines |Cystine-knot cytokines |Neurotrophin |Neurotrophin 3, NT3 |Human (Homo sapiens) [TaxId: 9606]
d1btga_ : (THR81) (ARG114) [view usage] : g.17.1.3 |Cystine-knot cytokines |Cystine-knot cytokines |Neurotrophin |beta-Nerve growth factor |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.144, g.17