Tableau information
Concept source: d2r33b_ amino acid (a.a.) range (SER21)(ASP63)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER21) (THR25) E1
(PRO29) (LEU39) E2
(LYS47) (PHE53) E3
(SER58) (ASP63) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 153.5° E2
E3 118.4° -40.3° E3
E4 -40.3° 159.1° 158.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ug9a4 : (GLN59) (ASP95) [view usage] : b.30.5.5 |Supersandwich |Galactose mutarotase-like |Bacterial glucoamylase N-terminal domain-like |Glucodextranase, domain N |Arthrobacter globiformis [TaxId: 1665]
d1mzwa_ : (GLU50) (ASP78) [view usage] : b.62.1.1 |Cyclophilin-like |Cyclophilin-like |Cyclophilin (peptidylprolyl isomerase) |Cyclophilin (eukaryotic) |Human (Homo sapiens), U4/U6 snRNP-specific cyclophilin snucyp-20 [TaxId: 9606]
d2eyra2 : (ALA124) (ASN183) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4b5da_ : (PRO97) (PRO130) [view usage] : b.96.1.0 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |automated matches |Capitella teleta [TaxId: 283909]
d2oxha_ : (GLN34) (PRO67) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Paracoccus denitrificans [TaxId: 266]
d1slia2 : (GLU627) (SER666) [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Leech intramolecular trans-sialidase, C-terminal domain |North american leech (Macrobdella decora) [TaxId: 6405]
d2abwb_ : (LYS95) (ARG154) [view usage] : c.23.16.0 |Flavodoxin-like |Class I glutamine amidotransferase-like |automated matches |automated matches |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d4onha2 : (LYS114) (ASN177) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1eg1a_ : (GLN2) (ASP35) [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Trichoderma reesei, Endoglucanase I [TaxId: 51453]
d1m1lc_ : (GLY158) (GLY202) [view usage] : d.260.1.1 |Suppressor of Fused, N-terminal domain |Suppressor of Fused, N-terminal domain |Suppressor of Fused, N-terminal domain |Suppressor of Fused, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2rfwa_ : (ARG2) (ILE34) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Fungus (Melanocarpus albomyces) [TaxId: 204285]
d2y3nc_ : (ALA114) (PRO172) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |automated matches |Bacteroides cellulosolvens [TaxId: 35825]
d2ilni_ : (PHE11) (ASP52) [view usage] : g.3.13.1 |Knottins (small inhibitors, toxins, lectins) |Bowman-Birk inhibitor, BBI |Bowman-Birk inhibitor, BBI |Bowman-Birk inhibitor, BBI |Snail medic (Medicago scutellata) [TaxId: 36901]
d1idpa_ : (LYS119) (ILE151) [view usage] : d.17.4.1 |Cystatin-like |NTF2-like |Scytalone dehydratase |Scytalone dehydratase |Fungus (Magnaporthe grisea) [TaxId: 148305]
d2plfa1 : (GLY245) (THR274) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Initiation factor eIF2 gamma subunit, domain II |Sulfolobus solfataricus [TaxId: 2287]
d1c2aa2 : (LYS71) (GLY116) [view usage] : g.3.13.1 |Knottins (small inhibitors, toxins, lectins) |Bowman-Birk inhibitor, BBI |Bowman-Birk inhibitor, BBI |Bowman-Birk inhibitor, BBI |Barley (Hordeum vulgare) [TaxId: 4513]
d3gsna2 : (ASN114) (ASN177) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1m1la_ : (GLY158) (GLY202) [view usage] : d.260.1.1 |Suppressor of Fused, N-terminal domain |Suppressor of Fused, N-terminal domain |Suppressor of Fused, N-terminal domain |Suppressor of Fused, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2oxga_ : (GLN34) (PRO67) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Paracoccus denitrificans [TaxId: 266]
d3mywi_ : (SER15) (THR58) [view usage] : g.3.13.1 |Knottins (small inhibitors, toxins, lectins) |Bowman-Birk inhibitor, BBI |Bowman-Birk inhibitor, BBI |automated matches |Vigna radiata [TaxId: 3916]
d2r33b_ : (SER21) (ASP63) [view usage] : g.3.13.1 |Knottins (small inhibitors, toxins, lectins) |Bowman-Birk inhibitor, BBI |Bowman-Birk inhibitor, BBI |automated matches |Cowpea (Vigna unguiculata) [TaxId: 3917]
d4hlta_ : (ILE139) (PRO178) [view usage] : b.82.1.12 |Double-stranded beta-helix |RmlC-like cupins |Pirin-like |Pirin |Human (Homo sapiens) [TaxId: 9606]
d3nsfa1 : (PRO35) (TYR69) [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |multi-copper oxidase CueO |Escherichia coli [TaxId: 562]
d2bcmc_ : (GLY42) (ALA87) [view usage] : b.2.3.0 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1mvza_ : (PHE11) (ILE53) [view usage] : g.3.13.1 |Knottins (small inhibitors, toxins, lectins) |Bowman-Birk inhibitor, BBI |Bowman-Birk inhibitor, BBI |Bowman-Birk inhibitor, BBI |Snail medic (Medicago scutellata) [TaxId: 36901]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.82, b.29, b.30, c.23, b.2, b.6, b.1, b.96, d.17, b.62, b.43, g.3, d.260