Tableau information
Concept source: d2zkna_ amino acid (a.a.) range (THR70)(PRO109)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR70) (ALA75) E1
(SER83) (ASP92) E2
(ASN95) (PRO101) E3
(TYR104) (PRO109) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 126.7° E2
E3 -32.8° 157.6° E3
E4 168.5° -43.4° 158.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1pgua1 : (SER196) (ASP235) [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |Actin interacting protein 1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2grka_ : (GLY23) (LYS85) [view usage] : b.27.1.1 |Soluble secreted chemokine inhibitor, VCCI |Soluble secreted chemokine inhibitor, VCCI |Soluble secreted chemokine inhibitor, VCCI |automated matches |Ectromelia virus [TaxId: 265874]
d1yocb_ : (ARG89) (GLN144) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein PA1835 |Pseudomonas aeruginosa [TaxId: 287]
d1jqqb_ : (LEU14) (ALA41) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Peroxisomal membrane protein Pex13p |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1vg9a2 : (GLN445) (MET508) [view usage] : d.16.1.6 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |GDI-like |Rab escort protein 1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2qwzd_ : (THR82) (PRO138) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Silicibacter sp. [TaxId: 292414]
d2essa2 : (ARG199) (GLU247) [view usage] : d.38.1.8 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |Acyl-ACP thioesterase-like |Acyl-ACP thioesterase |Bacteroides thetaiotaomicron [TaxId: 818]
d1ajoa_ : (GLY3) (ALA44) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Bacillus 1-3,1-4-beta-glucanase |Bacillus macerans [TaxId: 44252]
d2o6tc_ : (GLU60) (PHE120) [view usage] : d.38.1.1 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |4HBT-like |Hypothetical thioesterase PA5185 |Pseudomonas aeruginosa [TaxId: 287]
d1zrua1 : (GLY200) (GLY245) [view usage] : b.21.1.3 |Virus attachment protein globular domain |Virus attachment protein globular domain |Lactophage receptor-binding protein head domain |receptor binding protein, rbp, C-terminal domain |Lactococcus lactis phage p2 [TaxId: 100641]
d3lbba_ : (LEU69) (GLY124) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Streptococcus mutans [TaxId: 210007]
d1naea_ : (ASP35) (LYS66) [view usage] : b.18.1.10 |Galactose-binding domain-like |Galactose-binding domain-like |Family 6 carbohydrate binding module, CBM6 |Putative xylanase |Clostridium stercorarium [TaxId: 1510]
d2vsga_ : (SER167) (PRO223) [view usage] : h.4.1.1 |Antiparallel coiled-coil |Variant surface glycoprotein (N-terminal domain) |Variant surface glycoprotein (N-terminal domain) |Variant surface glycoprotein (N-terminal domain) |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d3jxfa_ : (LEU80) (GLY114) [view usage] : b.74.1.0 |Carbonic anhydrase |Carbonic anhydrase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4um8a1 : (GLN394) (ALA437) [view usage] : b.69.8.1 |7-bladed beta-propeller |Integrin alpha N-terminal domain |Integrin alpha N-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3lbed_ : (LEU69) (VAL122) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Streptococcus mutans [TaxId: 210007]
d1fwxd2 : (PHE259) (ASP295) [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Paracoccus denitrificans [TaxId: 266]
d1a12a_ : (ILE337) (GLY370) [view usage] : b.69.5.1 |7-bladed beta-propeller |RCC1/BLIP-II |Regulator of chromosome condensation RCC1 |Regulator of chromosome condensation RCC1 |Human (Homo sapiens) [TaxId: 9606]
d1qssa1 : (ALA293) (GLU337) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Thermus aquaticus [TaxId: 271]
d1t82a_ : (ASP79) (PRO143) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Putative thioesterase SO4397 |Shewanella oneidensis [TaxId: 70863]
d2glvh_ : (ASP105) (ILE155) [view usage] : d.38.1.6 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |FabZ-like |(3R)-hydroxymyristoyl ACP dehydrase FabZ |Helicobacter pylori [TaxId: 210]
d1p9ma3 : (LYS197) (THR241) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Cytokine receptor gp130 cytokine-binding domains |Human (Homo sapiens) [TaxId: 9606]
d1fwxb2 : (PHE259) (ASP295) [view usage] : b.69.3.1 |7-bladed beta-propeller |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Nitrous oxide reductase, N-terminal domain |Paracoccus denitrificans [TaxId: 266]
d1uy2a_ : (ILE16) (SER61) [view usage] : b.18.1.10 |Galactose-binding domain-like |Galactose-binding domain-like |Family 6 carbohydrate binding module, CBM6 |Putative xylanase |Clostridium stercorarium [TaxId: 1510]
d1cq3a_ : (GLY18) (LYS78) [view usage] : b.27.1.1 |Soluble secreted chemokine inhibitor, VCCI |Soluble secreted chemokine inhibitor, VCCI |Soluble secreted chemokine inhibitor, VCCI |Soluble secreted chemokine inhibitor, VCCI |Cowpox virus [TaxId: 10243]
d3jxgc_ : (GLU101) (GLY136) [view usage] : b.74.1.0 |Carbonic anhydrase |Carbonic anhydrase |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.69, b.29, b.74, c.55, b.18, b.1, d.38, b.21, b.34, d.16, h.4, b.27