Protein Concepts Dictionary

Tableau information

Concept source:  d4h3oa_  amino acid (a.a.) range (ASN2)(ILE24)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: EEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ASN2)    (ASN6) E1
	    (ASN6)   (ALA12) E2
	   (ALA12)   (VAL18) E3
	   (PRO20)   (ILE24) E4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                          
E2     -125.2°   E2                   
E3     -120.1° -113.2°   E3            
E4       34.1°  -91.5°  154.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2iobb2 :    (LEU99)  (GLN137)   [view usage] : d.3.1.15 |Cysteine proteinases |Cysteine proteinases |CHAP domain |Glutathionylspermidine synthase, amidase domain |Escherichia coli [TaxId: 562]
 d4okca_ :     (ASP3)   (THR27)   [view usage] : b.78.1.0 |beta-Prism II |alpha-D-mannose-specific plant lectins |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d2d04b_ :     (ASN2)   (ILE25)   [view usage] : b.78.1.0 |beta-Prism II |alpha-D-mannose-specific plant lectins |automated matches |automated matches |Curculigo latifolia [TaxId: 4676]
 d2d04f_ :     (ASN2)   (ILE25)   [view usage] : b.78.1.0 |beta-Prism II |alpha-D-mannose-specific plant lectins |automated matches |automated matches |Curculigo latifolia [TaxId: 4676]
 d1jpca_ :     (ASN2)   (ILE24)   [view usage] : b.78.1.1 |beta-Prism II |alpha-D-mannose-specific plant lectins |alpha-D-mannose-specific plant lectins |Lectin (agglutinin) |Snowdrop (Galanthus nivalis) [TaxId: 4670]
 d1umzb_ :    (TYR75)  (GLY108)   [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |Xyloglucan endotransglycosylase |European aspen (Populus tremula) [TaxId: 113636]
 d1xd5d_ :     (ASP2)   (ILE24)   [view usage] : b.78.1.1 |beta-Prism II |alpha-D-mannose-specific plant lectins |alpha-D-mannose-specific plant lectins |Gastrodianin (antifungal protein) |Gastrodia elata [TaxId: 91201]
 d3a0da_ :     (ASN2)   (ILE25)   [view usage] : b.78.1.0 |beta-Prism II |alpha-D-mannose-specific plant lectins |automated matches |automated matches |Polygonatum cyrtonema [TaxId: 195526]
 d1bwua_ :     (ASN2)   (ILE24)   [view usage] : b.78.1.1 |beta-Prism II |alpha-D-mannose-specific plant lectins |alpha-D-mannose-specific plant lectins |Lectin (agglutinin) |Garlic (Allium sativum) [TaxId: 4682]
 d2d04c_ :     (SER2)   (THR24)   [view usage] : b.78.1.0 |beta-Prism II |alpha-D-mannose-specific plant lectins |automated matches |automated matches |Curculigo latifolia [TaxId: 4676]
 d1xd5a_ :     (ASP2)   (ILE24)   [view usage] : b.78.1.1 |beta-Prism II |alpha-D-mannose-specific plant lectins |alpha-D-mannose-specific plant lectins |Gastrodianin (antifungal protein) |Gastrodia elata [TaxId: 91201]
 d1bwud_ :     (ASN2)   (ILE24)   [view usage] : b.78.1.1 |beta-Prism II |alpha-D-mannose-specific plant lectins |alpha-D-mannose-specific plant lectins |Lectin (agglutinin) |Garlic (Allium sativum) [TaxId: 4682]
 d1npla_ :     (ASN2)   (ILE24)   [view usage] : b.78.1.1 |beta-Prism II |alpha-D-mannose-specific plant lectins |alpha-D-mannose-specific plant lectins |Lectin (agglutinin) |Daffodil (Narcissus pseudonarcissus) [TaxId: 39639]
 d4h3oa_ :     (ASN2)   (ILE24)   [view usage] : b.78.1.1 |beta-Prism II |alpha-D-mannose-specific plant lectins |alpha-D-mannose-specific plant lectins |automated matches |Garlic (Allium sativum) [TaxId: 4682]
 d3mezb_ :     (ASN7)   (MET30)   [view usage] : b.78.1.0 |beta-Prism II |alpha-D-mannose-specific plant lectins |automated matches |automated matches |Crocus vernus [TaxId: 87752]
 d3r0ea_ :     (ASN4)   (MET27)   [view usage] : b.78.1.0 |beta-Prism II |alpha-D-mannose-specific plant lectins |automated matches |automated matches |Remusatia vivipara [TaxId: 189456]
 d1kj1a_ :     (ASN2)   (ILE24)   [view usage] : b.78.1.1 |beta-Prism II |alpha-D-mannose-specific plant lectins |alpha-D-mannose-specific plant lectins |Lectin (agglutinin) |Garlic (Allium sativum) [TaxId: 4682]
 d3a0ca_ :     (ASN2)   (MET26)   [view usage] : b.78.1.0 |beta-Prism II |alpha-D-mannose-specific plant lectins |automated matches |automated matches |Polygonatum cyrtonema [TaxId: 195526]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.29,     d.3,    b.78