Tableau information
Concept source: d4m7ma_ amino acid (a.a.) range (ASN91)(ARG136)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN91) (LYS101) E1
(PRO105) (ASN115) E2
(LEU119) (THR124) E3
(ASP127) (ARG136) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 163.5° E2
E3 -33.6° 162.9° E3
E4 131.2° -32.3° 164.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1vs6g1 : (ALA6) (THR35) [view usage] : d.141.1.1 |Ribosomal protein L6 |Ribosomal protein L6 |Ribosomal protein L6 |Ribosomal protein L6 |Escherichia coli [TaxId: 562]
d1kzwa_ : (ASN87) (LYS130) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Intestinal fatty acid binding protein |Human (Homo sapiens) [TaxId: 9606]
d1iuba_ : (ILE266) (GLY307) [view usage] : b.68.8.1 |6-bladed beta-propeller |Fucose-specific lectin |Fucose-specific lectin |Fucose-specific lectin |Orange peel mushroom (Aleuria aurantia) [TaxId: 5188]
d1evtc1 : (GLY205) (GLU249) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fibroblast growth factor receptor, FGFR |Human (Homo sapiens), FGFR1 [TaxId: 9606]
d2uzxa2 : (ASP275) (LYS320) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Listeria monocytogenes [TaxId: 169963]
d3b83b_ : (GLU44) (LEU92) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1mdaa_ : (ALA66) (VAL104) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Amicyanin |Paracoccus denitrificans [TaxId: 266]
d1ar1b1 : (ASP159) (ASP193) [view usage] : b.6.1.2 |Cupredoxin-like |Cupredoxins |Periplasmic domain of cytochrome c oxidase subunit II |Cytochrome c oxidase |Paracoccus denitrificans [TaxId: 266]
d1w6sc_ : (ALA2057) (PRO2092) [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Methanol dehydrogenase, heavy chain |Methylobacterium extorquens [TaxId: 408]
d1bzwa_ : (MET50) (THR124) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Peanut (Arachis hypogaea) [TaxId: 3818]
d2yd8a2 : (ARG183) (VAL225) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1m9ga_ : (PRO41) (LEU87) [view usage] : d.17.1.1 |Cystatin-like |Cystatin/monellin |Monellin |Monellin, B & A chains together |Serendipity berry (Dioscoreophyllum cumminsii) [TaxId: 3457]
d1swgc_ : (TYR54) (GLY113) [view usage] : b.61.1.1 |Streptavidin-like |Avidin/streptavidin |Avidin/streptavidin |Streptavidin |Streptomyces avidinii [TaxId: 1895]
d1h6ua1 : (ASN297) (GLU343) [view usage] : b.1.18.15 |Immunoglobulin-like beta-sandwich |E set domains |Internalin Ig-like domain |Internalin H |Listeria monocytogenes [TaxId: 1639]
d2oyza1 : (SER2) (GLN40) [view usage] : b.82.1.22 |Double-stranded beta-helix |RmlC-like cupins |VPA0057-like |Uncharacterized protein VPA0057 |Vibrio parahaemolyticus [TaxId: 670]
d4akpa3 : (THR398) (ASP437) [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d3gaqa_ : (ASN27) (THR81) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |automated matches |Brown ear tick (Rhipicephalus appendiculatus) [TaxId: 34631]
d1cyxa_ : (ASN151) (MET186) [view usage] : b.6.1.2 |Cupredoxin-like |Cupredoxins |Periplasmic domain of cytochrome c oxidase subunit II |Quinol oxidase (CyoA) |Escherichia coli [TaxId: 562]
d1qh3a_ : (SER93) (ASP134) [view usage] : d.157.1.2 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Glyoxalase II (hydroxyacylglutathione hydrolase) |Glyoxalase II (hydroxyacylglutathione hydrolase) |Human (Homo sapiens) [TaxId: 9606]
d2wqwa2 : (ASP275) (GLU321) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Listeria monocytogenes [TaxId: 169963]
d3mlrl1 : (LEU62) (VAL109) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1lqmh_ : (ILE41) (LEU84) [view usage] : d.17.5.1 |Cystatin-like |Uracil-DNA glycosylase inhibitor protein |Uracil-DNA glycosylase inhibitor protein |Uracil-DNA glycosylase inhibitor protein |Bacteriophage pbs2 [TaxId: 10684]
d1im3d_ : (ASP93) (VAL134) [view usage] : b.1.18.5 |Immunoglobulin-like beta-sandwich |E set domains |Cytomegalovirus protein US2 |Cytomegalovirus protein US2 |Human cytomegalovirus [TaxId: 10359]
d1lqgc_ : (ASP40) (LEU84) [view usage] : d.17.5.1 |Cystatin-like |Uracil-DNA glycosylase inhibitor protein |Uracil-DNA glycosylase inhibitor protein |Uracil-DNA glycosylase inhibitor protein |Bacteriophage pbs2 [TaxId: 10684]
d2cr9a1 : (ALA45) (SER96) [view usage] : d.297.1.1 |WGR domain-like |WGR domain-like |WGR domain |Poly [ADP-ribose] polymerase-1, PARP-1 |Human (Homo sapiens) [TaxId: 9606]
d1euic_ : (ASP40) (LEU84) [view usage] : d.17.5.1 |Cystatin-like |Uracil-DNA glycosylase inhibitor protein |Uracil-DNA glycosylase inhibitor protein |Uracil-DNA glycosylase inhibitor protein |Bacteriophage pbs2 [TaxId: 10684]
d3cy4b_ : (GLN31) (GLY78) [view usage] : b.64.1.1 |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Cation-dependent mannose 6-phosphate receptor, extracytoplasmic domain |Cow (Bos taurus) [TaxId: 9913]
d2xzga1 : (ASN155) (GLU195) [view usage] : b.69.6.1 |7-bladed beta-propeller |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2xzga1 : (VAL262) (ARG297) [view usage] : b.69.6.1 |7-bladed beta-propeller |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hynp_ : (VAL57) (LEU99) [view usage] : d.112.1.2 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |Anion transport protein, cytoplasmic domain |Erythrocite membrane Band 3 |Human (Homo sapiens) [TaxId: 9606]
d3afka_ : (ASN44) (SER87) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Agrocybe aegerita [TaxId: 5400]
d1lqmb_ : (ASP40) (LEU84) [view usage] : d.17.5.1 |Cystatin-like |Uracil-DNA glycosylase inhibitor protein |Uracil-DNA glycosylase inhibitor protein |Uracil-DNA glycosylase inhibitor protein |Bacteriophage pbs2 [TaxId: 10684]
d3rtla_ : (ILE405) (ASP450) [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]
d1n7ml1 : (THR69) (SER113) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
d3ii7a_ : (ASP328) (LEU366) [view usage] : b.68.11.0 |6-bladed beta-propeller |Kelch motif |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3ii7a_ : (VAL519) (ALA557) [view usage] : b.68.11.0 |6-bladed beta-propeller |Kelch motif |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1zkpd_ : (GLU118) (SER153) [view usage] : d.157.1.9 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |YhfI-like |Hypothetical protein BA1088 (BAS1016) |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1a02n1 : (ALA626) (PRO677) [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |T-cell transcription factor NFAT1 (NFATC2) |Human (Homo sapiens) [TaxId: 9606]
d1kiua1 : (PRO53) (PRO117) [view usage] : b.1.11.1 |Immunoglobulin-like beta-sandwich |PapD-like |Pilus chaperone |Periplasmic chaperone FimC |Escherichia coli [TaxId: 562]
d3oj2c1 : (GLY206) (GLU250) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1swfb_ : (TYR54) (GLY113) [view usage] : b.61.1.1 |Streptavidin-like |Avidin/streptavidin |Avidin/streptavidin |Streptavidin |Streptomyces avidinii [TaxId: 1895]
d2ce8a_ : (CYS488) (LEU527) [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |Groucho/tle1, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1h4ja_ : (ALA57) (PRO92) [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Methanol dehydrogenase, heavy chain |Methylobacterium extorquens [TaxId: 408]
d3duka_ : (ASN71) (ALA124) [view usage] : d.17.4.0 |Cystatin-like |NTF2-like |automated matches |automated matches |Methylobacillus flagellatus [TaxId: 265072]
d1ofza_ : (THR264) (GLY307) [view usage] : b.68.8.1 |6-bladed beta-propeller |Fucose-specific lectin |Fucose-specific lectin |Fucose-specific lectin |Orange peel mushroom (Aleuria aurantia) [TaxId: 5188]
d3gvka1 : (GLU581) (PRO623) [view usage] : b.68.1.2 |6-bladed beta-propeller |Sialidases |Endo-alpha-sialidase |automated matches |Enterobacteria phage [TaxId: 344021]
d1qvea_ : (LYS80) (ASN132) [view usage] : d.24.1.1 |Pili subunits |Pili subunits |Pilin |Pilin P1 |Pseudomonas aeruginosa [TaxId: 287]
d3muna1 : (ARG232) (GLN274) [view usage] : b.69.7.0 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |automated matches |automated matches |Aeromonas punctata [TaxId: 648]
d4mypb_ : (VAL252) (PHE299) [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Listeria monocytogenes [TaxId: 1639]
d1pnfa2 : (LYS171) (GLY227) [view usage] : b.121.1.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |PHM/PNGase F |Glycosyl-asparaginase |Peptide:N-glycosidase F, PNGase F |Flavobacterium meningosepticum [TaxId: 238]
d3pmsa2 : (LYS171) (GLY227) [view usage] : b.121.1.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |PHM/PNGase F |Glycosyl-asparaginase |automated matches |Elizabethkingia meningoseptica [TaxId: 238]
d1zkpc_ : (GLU118) (SER153) [view usage] : d.157.1.9 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |YhfI-like |Hypothetical protein BA1088 (BAS1016) |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d2yz8a_ : (SER506) (ALA546) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2j8xd_ : (ASP40) (LEU84) [view usage] : d.17.5.1 |Cystatin-like |Uracil-DNA glycosylase inhibitor protein |Uracil-DNA glycosylase inhibitor protein |Uracil-DNA glycosylase inhibitor protein |Bacteriophage pbs2 [TaxId: 10684]
d1n1ic2 : (GLU66) (SER97) [view usage] : g.3.11.4 |Knottins (small inhibitors, toxins, lectins) |EGF/Laminin |Merozoite surface protein 1 (MSP-1) |Merozoite surface protein 1 (MSP-1) |Malaria parasite (Plasmodium knowlesi) [TaxId: 5850]
d3iuna1 : (ARG232) (GLN274) [view usage] : b.69.7.0 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |automated matches |automated matches |Aeromonas punctata [TaxId: 648]
d1g72a_ : (ALA57) (PRO92) [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Methanol dehydrogenase, heavy chain |Methylophilus methylotrophus, w3a1 [TaxId: 17]
d1q47b_ : (THR59) (PRO94) [view usage] : b.69.12.1 |7-bladed beta-propeller |Sema domain |Sema domain |Semaphorin 3a |Mouse (Mus musculus) [TaxId: 10090]
d3qi0a_ : (SER43) (GLY88) [view usage] : b.69.5.2 |7-bladed beta-propeller |RCC1/BLIP-II |beta-lactamase inhibitor protein-II, BLIP-II |automated matches |Streptomyces exfoliatus [TaxId: 1905]
d1kv9a2 : (GLN300) (GLY343) [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase, N-terminal domain |Pseudomonas putida, hk5 [TaxId: 303]
d3pxja1 : (THR84) (TYR130) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2joza1 : (GLY19) (LYS65) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Hypothetical protein YxeF |Bacillus subtilis [TaxId: 1423]
d2f8vc1 : (GLY53) (ALA99) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2rl8b_ : (GLN31) (GLY78) [view usage] : b.64.1.1 |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Cation-dependent mannose 6-phosphate receptor, extracytoplasmic domain |Cow (Bos taurus) [TaxId: 9913]
d2kvaa_ : (ALA613) (GLY656) [view usage] : b.64.1.1 |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Cation-independent mannose-6-phosphate receptor (MIR-receptor) |Cow (Bos taurus) [TaxId: 9913]
d1hynr_ : (TYR58) (LEU99) [view usage] : d.112.1.2 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |Anion transport protein, cytoplasmic domain |Erythrocite membrane Band 3 |Human (Homo sapiens) [TaxId: 9606]
d1pooa_ : (ASP55) (HIS94) [view usage] : b.68.3.1 |6-bladed beta-propeller |Thermostable phytase (3-phytase) |Thermostable phytase (3-phytase) |Thermostable phytase (3-phytase) |Bacillus amyloliquefaciens [TaxId: 1390]
d4orgl1 : (SER63) (VAL106) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ay2a_ : (LYS79) (CYS121) [view usage] : d.24.1.1 |Pili subunits |Pili subunits |Pilin |Pilin Gc |Neisseria gonorrhoeae [TaxId: 485]
d1lqmd_ : (ILE41) (LEU84) [view usage] : d.17.5.1 |Cystatin-like |Uracil-DNA glycosylase inhibitor protein |Uracil-DNA glycosylase inhibitor protein |Uracil-DNA glycosylase inhibitor protein |Bacteriophage pbs2 [TaxId: 10684]
d1hynq_ : (TYR58) (LEU99) [view usage] : d.112.1.2 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |Anion transport protein, cytoplasmic domain |Erythrocite membrane Band 3 |Human (Homo sapiens) [TaxId: 9606]
d1xeua2 : (GLY251) (ASN297) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Listeria monocytogenes [TaxId: 1639]
d1blra_ : (PRO39) (GLN74) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]
d1mcph2 : (ILE130) (PHE175) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain alpha constant domain 1, CH1-alpha |Mouse (Mus musculus) [TaxId: 10090]
d1olza1 : (LYS579) (VAL627) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Semaphorin 4d Ig-like domain |Human (Homo sapiens) [TaxId: 9606]
d3sikb_ : (LEU101) (ASP147) [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1jofa_ : (THR92) (GLN142) [view usage] : b.69.10.1 |7-bladed beta-propeller |3-carboxy-cis,cis-mucoante lactonizing enzyme |3-carboxy-cis,cis-mucoante lactonizing enzyme |3-carboxy-cis,cis-mucoante lactonizing enzyme |Fungus (Neurospora crassa) [TaxId: 5141]
d3i3ya_ : (ASP177) (PRO218) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 272620]
d4mypa_ : (VAL252) (PHE299) [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Listeria monocytogenes [TaxId: 1639]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.70, b.82, b.69, b.29, d.157, c.72, b.60, b.121, b.6, b.1, d.17, b.61, d.112, d.24, g.3, b.64, d.141, d.297