Tableau information
Concept source: d2ak5b_ amino acid (a.a.) range (GLN8)(VAL35)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN8) (ARG12) E1
(PHE15) (GLN19) E2
(ASP23) (SER28) E3
(ASP31) (VAL35) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -111.7° E2
E3 -46.9° -146.3° E3
E4 153.3° 66.2° -145.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ns0b_ : (GLY62) (HIS96) [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Lactococcus lactis [TaxId: 1358]
d1gcqa_ : (SER158) (VAL185) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains |Human (Homo sapiens) [TaxId: 9606]
d1semb_ : (THR156) (LEU183) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains |Caenorhabditis elegans, SEM-5 [TaxId: 6239]
d2jtea_ : (LYS6) (HIS32) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2d8ja_ : (SER5) (ASP36) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1k4us_ : (GLY459) (LEU487) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |p67phox |Human (Homo sapiens) [TaxId: 9606]
d1x2qa_ : (ALA17) (ASP46) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1kfza_ : (GLU155) (LEU183) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains |Caenorhabditis elegans, SEM-5 [TaxId: 6239]
d1phta_ : (ALA3) (ASN33) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain |Human (Homo sapiens) [TaxId: 9606]
d1wyxb_ : (HIS1) (THR29) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2c0ia1 : (ARG59) (VAL85) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Hemapoetic cell kinase Hck |Human (Homo sapiens) [TaxId: 9606]
d2ysqa_ : (ASP8) (ASP39) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1k1za_ : (LEU12) (LEU45) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Vav N-terminal SH3 domain |Mouse (Mus musculus) [TaxId: 10090]
d1w1fa_ : (GLN9) (LEU38) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1oota_ : (SER1) (LEU29) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Hypothetical protein YFR024c |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3ulrb_ : (GLY490) (ASN517) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2ew3a_ : (MET1) (THR31) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2semb_ : (THR256) (LEU283) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains |Caenorhabditis elegans, SEM-5 [TaxId: 6239]
d1i0cb_ : (LYS6) (ILE33) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |EPS8 SH3 domain |Mouse (Mus musculus) [TaxId: 10090]
d2l2pa_ : (SER1) (ASN30) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Fyn proto-oncogene tyrosine kinase, SH3 domain |Chicken (Gallus gallus) [TaxId: 9031]
d1p3ha_ : (LYS36) (TYR73) [view usage] : b.35.1.1 |GroES-like |GroES-like |GroES |Chaperonin-10 (GroES) |Mycobacterium tuberculosis [TaxId: 1773]
d4lnpa_ : (GLU794) (TYR823) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ru4a_ : (GLY90) (PHE121) [view usage] : b.80.1.9 |Single-stranded right-handed beta-helix |Pectin lyase-like |Pectate transeliminase |Pectate transeliminase |Erwinia chrysanthemi [TaxId: 556]
d1nt3a_ : (CYS14) (PHE52) [view usage] : g.17.1.3 |Cystine-knot cytokines |Cystine-knot cytokines |Neurotrophin |Neurotrophin 3, NT3 |Human (Homo sapiens) [TaxId: 9606]
d1qcfa1 : (ARG83) (VAL110) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Hemapoetic cell kinase Hck |Human (Homo sapiens) [TaxId: 9606]
d1le5a2 : (MET18) (GLY65) [view usage] : b.2.5.3 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |Rel/Dorsal transcription factors, DNA-binding domain |p65 subunit of NF-kappa B (NFKB), N-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
d3m0sa_ : (LYS6) (THR32) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |alpha-Spectrin, SH3 domain |Chicken (Gallus gallus) [TaxId: 9031]
d2gqia_ : (SER6) (HIS36) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nega_ : (LYS6) (THR32) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |alpha-Spectrin, SH3 domain |Chicken (Gallus gallus) [TaxId: 9031]
d2o2wa_ : (PHE822) (ARG852) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1z9za_ : (MET2) (ASP31) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1aoja_ : (LYS6) (ASP35) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |EPS8 SH3 domain |Mouse (Mus musculus) [TaxId: 10090]
d1uj0a_ : (MET203) (ASP233) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Signal transducing adaptor molecule Stam2 |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, b.30, b.2, b.34, g.17, b.35