Tableau information
Concept source: d3b83d_ amino acid (a.a.) range (LEU1)(ASP48)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU1) (ASN11) E1
(ALA17) (GLN22) E2
(GLY30) (GLY36) E3
(GLU44) (ASP48) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 145.0° E2
E3 -44.3° 149.1° E3
E4 117.5° -45.9° 161.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1pgua1 : (ASN19) (GLY61) [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |Actin interacting protein 1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1pi6a1 : (ASN19) (GLY61) [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |Actin interacting protein 1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1sdja2 : (LEU242) (PHE289) [view usage] : d.21.1.2 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |PhzC/PhzF-like |Hypothetical protein YddE |Escherichia coli [TaxId: 562]
d2dtge3 : (PRO536) (ALA592) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Insulin receptor |Human (Homo sapiens) [TaxId: 9606]
d2dy1a2 : (PRO155) (GLU190) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Elongation factor G (EF-G), N-terminal (G) domain |Thermus thermophilus, EF-G-2 [TaxId: 274]
d2cuia1 : (GLN60) (ARG104) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Tenascin-X |Human (Homo sapiens) [TaxId: 9606]
d1l3wa3 : (PHE268) (ASP325) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |C-cadherin ectodomain |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1eqka_ : (SER49) (LEU90) [view usage] : d.17.1.2 |Cystatin-like |Cystatin/monellin |Cystatins |Phytocystatin |Japanese rice (Oryza sativa), subsp. japonica, oryzacystatin-I [TaxId: 4530]
d1ctoa_ : (LEU9) (HIS61) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Granulocyte colony-stimulating factor (GC-SF) receptor |Mouse (Mus musculus) [TaxId: 10090]
d3s6ca1 : (PRO1005) (SER1052) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1n6ua2 : (PRO110) (GLU157) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Interferon-alpha/beta receptor beta chain |Human (Homo sapiens) [TaxId: 9606]
d1ef1a2 : (GLY202) (PRO241) [view usage] : b.55.1.5 |PH domain-like barrel |PH domain-like |Third domain of FERM |Moesin |Human (Homo sapiens) [TaxId: 9606]
d1jqpa1 : (ASP48) (PHE80) [view usage] : b.61.5.1 |Streptavidin-like |Dipeptidyl peptidase I (cathepsin C), exclusion domain |Dipeptidyl peptidase I (cathepsin C), exclusion domain |Dipeptidyl peptidase I (cathepsin C), exclusion domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2p4oa1 : (ASN119) (ILE151) [view usage] : b.68.6.3 |6-bladed beta-propeller |Calcium-dependent phosphotriesterase |All0351-like |Hypothetical protein All0351 homologue |Nostoc punctiforme [TaxId: 272131]
d3n08a_ : (PRO28) (LEU87) [view usage] : b.17.1.0 |PEBP-like |PEBP-like |automated matches |automated matches |Chlamydia trachomatis [TaxId: 272561]
d1ug9a2 : (PRO692) (PRO733) [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Glucodextranase, domain B |Arthrobacter globiformis [TaxId: 1665]
d2ayda_ : (GLY316) (GLY359) [view usage] : g.79.1.0 |WRKY DNA-binding domain |WRKY DNA-binding domain |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2ee2a_ : (ASN65) (THR110) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1sgha2 : (GLY202) (PRO241) [view usage] : b.55.1.5 |PH domain-like barrel |PH domain-like |Third domain of FERM |Moesin |Human (Homo sapiens) [TaxId: 9606]
d1q55a_ : (PHE268) (ASP325) [view usage] : i.20.1.1 |Ep-cadherin |Ep-cadherin |Ep-cadherin |Ep-cadherin |Mouse (Mus musculus) [TaxId: 10090]
d4l05a_ : (ARG96) (VAL152) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase, SOD |Brucella abortus [TaxId: 235]
d2eica3 : (ALA172) (THR218) [view usage] : b.69.1.1 |7-bladed beta-propeller |Galactose oxidase, central domain |Galactose oxidase, central domain |Galactose oxidase, central domain |Fusarium graminearum (Gibberella zeae) [TaxId: 5518]
d2a73b2 : (LEU1334) (SER1384) [view usage] : b.1.29.1 |Immunoglobulin-like beta-sandwich |Macroglobulin |Alpha-macroglobulin receptor domain |Complement C3 MG8 |Human (Homo sapiens) [TaxId: 9606]
d3n1ha_ : (GLY55) (SER119) [view usage] : d.18.1.0 |ssDNA-binding transcriptional regulator domain |ssDNA-binding transcriptional regulator domain |automated matches |automated matches |Potato (Solanum tuberosum) [TaxId: 4113]
d1x5fa1 : (ARG63) (THR111) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Neogenin |Human (Homo sapiens) [TaxId: 9606]
d1hzua2 : (PRO278) (GLY321) [view usage] : b.70.2.1 |8-bladed beta-propeller |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |Pseudomonas aeruginosa [TaxId: 287]
d4iyaa_ : (ASN2) (LYS49) [view usage] : f.6.1.0 |Leukocidin-like |Leukocidin-like |automated matches |automated matches |Staphylococcus phage [TaxId: 71366]
d1dl5b2 : (ARG250) (GLY278) [view usage] : d.197.1.1 |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d1szba1 : (ALA68) (ALA121) [view usage] : b.23.1.1 |CUB-like |Spermadhesin, CUB domain |Spermadhesin, CUB domain |Mannose-binding protein associated serine protease 2, MASP2 |Human (Homo sapiens) [TaxId: 9606]
d1wisa1 : (ILE69) (GLN109) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Sidekick 2 |Human (Homo sapiens) [TaxId: 9606]
d1iawa_ : (VAL92) (LEU132) [view usage] : c.52.1.9 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease NaeI |Restriction endonuclease NaeI |Nocardia aerocolonigenes [TaxId: 68170]
d1qupb1 : (SER78) (ILE133) [view usage] : b.1.8.1 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |Cu,Zn superoxide dismutase-like |Copper chaperone for superoxide dismutase, C-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1v57a2 : (LYS19) (GLY53) [view usage] : d.17.3.1 |Cystatin-like |DsbC/DsbG N-terminal domain-like |DsbC/DsbG N-terminal domain-like |Thiol:disulfide interchange protein DsbG, N-terminal domain |Escherichia coli [TaxId: 562]
d1uv4a1 : (ALA3) (SER42) [view usage] : b.67.2.1 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |alpha-L-arabinanase-like |Endo-1,5-arabinanase |Bacillus subtilis [TaxId: 1423]
d1rl6a2 : (LYS84) (PRO116) [view usage] : d.141.1.1 |Ribosomal protein L6 |Ribosomal protein L6 |Ribosomal protein L6 |Ribosomal protein L6 |Bacillus stearothermophilus [TaxId: 1422]
d3n08b_ : (PRO27) (LEU87) [view usage] : b.17.1.0 |PEBP-like |PEBP-like |automated matches |automated matches |Chlamydia trachomatis [TaxId: 272561]
d2b1xa1 : (ALA45) (LEU85) [view usage] : b.33.1.2 |ISP domain |ISP domain |Ring hydroxylating alpha subunit ISP domain |Naphthalene 1,2-dioxygenase alpha subunit, N-domain |Rhodococcus sp. ncimb12038 [TaxId: 92694]
d4mrta2 : (SER167) (ALA206) [view usage] : d.150.1.1 |4'-phosphopantetheinyl transferase |4'-phosphopantetheinyl transferase |4'-Phosphopantetheinyl transferase SFP |automated matches |Bacillus subtilis [TaxId: 224308]
d1k7ya3 : (PRO1003) (CYS1042) [view usage] : d.173.1.1 |Methionine synthase activation domain-like |Methionine synthase activation domain-like |Methionine synthase SAM-binding domain |Methionine synthase SAM-binding domain |Escherichia coli [TaxId: 562]
d1dl5a2 : (ARG250) (GLY278) [view usage] : d.197.1.1 |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d3b83d_ : (LEU1) (ASP48) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4b9fa_ : (LEU2) (CYS55) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cellusomal scaffolding protein A, scaffoldin |Clostridium thermocellum [TaxId: 203119]
d1d0qa_ : (GLN28) (GLY63) [view usage] : g.41.3.2 |Rubredoxin-like |Zinc beta-ribbon |DNA primase zinc finger |Zinc-binding domain of DNA primase |Bacillus stearothermophilus [TaxId: 1422]
d2eida3 : (ALA172) (THR218) [view usage] : b.69.1.1 |7-bladed beta-propeller |Galactose oxidase, central domain |Galactose oxidase, central domain |automated matches |Fusarium graminearum (Gibberella zeae) [TaxId: 5518]
d2h0hb2 : (LYS19) (GLY53) [view usage] : d.17.3.1 |Cystatin-like |DsbC/DsbG N-terminal domain-like |DsbC/DsbG N-terminal domain-like |Thiol:disulfide interchange protein DsbG, N-terminal domain |Escherichia coli [TaxId: 562]
d1r57a_ : (GLU5) (ILE38) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein SA2309 |Staphylococcus aureus [TaxId: 1280]
d2bcmc_ : (SER91) (GLY134) [view usage] : b.2.3.0 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2p13a1 : (TYR482) (ARG514) [view usage] : d.145.1.4 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CorC/HlyC domain-like |Uncharacterized protein NE2227 |Nitrosomonas europaea [TaxId: 915]
d4gezj_ : (GLY391) (ASP441) [view usage] : b.68.1.0 |6-bladed beta-propeller |Sialidases |automated matches |automated matches |Influenza A virus [TaxId: 11320]
d2jxmb1 : (LEU103) (GLY157) [view usage] : i.4.1.1 |Electron transport chains |Electron transport chains |Electron transport chains |Cytochrome f-plastocyanin complex |Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
d3jt0a_ : (THR25) (LYS69) [view usage] : b.1.16.0 |Immunoglobulin-like beta-sandwich |Lamin A/C globular tail domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2q3za2 : (MET473) (LEU530) [view usage] : b.1.5.1 |Immunoglobulin-like beta-sandwich |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Human (Homo sapiens), tissue isozyme [TaxId: 9606]
d1t83c2 : (TRP90) (HIS134) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fc gamma receptor ectodomain (CD32) |Human (Homo sapiens), III [TaxId: 9606]
d1pexa_ : (SER281) (LEU316) [view usage] : b.66.1.1 |4-bladed beta-propeller |Hemopexin-like domain |Hemopexin-like domain |Collagenase-3 (MMP-13), C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2e7da_ : (ALA17) (GLU67) [view usage] : b.1.28.0 |Immunoglobulin-like beta-sandwich |NEAT domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]
d1kf9b2 : (THR384) (LEU433) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Growth hormone receptor |Human (Homo sapiens) [TaxId: 9606]
d1jv2a2 : (VAL601) (GLY655) [view usage] : b.1.15.1 |Immunoglobulin-like beta-sandwich |Integrin domains |Integrin domains |Thigh, calf-1 and calf-2 domains of integrin alpha |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.70, b.69, b.67, c.37, b.2, b.1, d.108, d.17, d.21, b.55, c.52, d.145, d.150, b.61, b.17, i.20, b.33, b.23, b.66,
g.41, f.6, d.18, i.4, g.79, d.173, d.141, d.197