Protein Concepts Dictionary

Tableau information

Concept source:  d4h0ya2  amino acid (a.a.) range (TYR379)(ASN413)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: EEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (TYR379)  (ASN384) E1
	  (SER387)  (LYS393) E2
	  (LYS393)  (LYS398) E3
	  (VAL402)  (ASN413) E4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                          
E2      115.2°   E2                   
E3     -146.8°  -69.6°   E3            
E4       49.8°  128.4°  154.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3q5vb_ :    (LEU83)  (GLU112)   [view usage] : b.40.5.1 |OB-fold |Inorganic pyrophosphatase |Inorganic pyrophosphatase |automated matches |Thermococcus thioreducens [TaxId: 277988]
 d1bcpd_ :     (TYR4)   (LYS36)   [view usage] : b.40.2.1 |OB-fold |Bacterial enterotoxins |Bacterial AB5 toxins, B-subunits |Pertussis toxin S4 subunit |Bordetella pertussis [TaxId: 520]
 d2c8ca_ :   (LEU213)  (GLY245)   [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |automated matches |Clostridium botulinum [TaxId: 1491]
 d1giqa2 :   (TYR379)  (ASN413)   [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Enzymatic component (Ia) of iota-toxin |Clostridium perfringens [TaxId: 1502]
 d2wn4a2 :   (TYR386)  (PRO420)   [view usage] : d.166.1.0 |ADP-ribosylation |ADP-ribosylation |automated matches |automated matches |Clostridium difficile [TaxId: 1496]
 d2h6sa_ :    (GLU62)   (ASP97)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |automated matches |Yeast (Candida albicans) [TaxId: 5476]
 d4h0xa2 :   (TYR379)  (ASN413)   [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |automated matches |Clostridium perfringens [TaxId: 1502]
 d4h0va2 :   (TYR379)  (ASN413)   [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |automated matches |Clostridium perfringens [TaxId: 1502]
 d2c8gd_ :   (LEU213)  (GLY245)   [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |automated matches |Clostridium botulinum [TaxId: 1491]
 d1r45a_ :   (LEU212)  (LYS244)   [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Exoenzyme c3 |Clostridium botulinum C bacteriophage [TaxId: 12336]
 d2c8gc_ :   (LEU213)  (GLY245)   [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |automated matches |Clostridium botulinum [TaxId: 1491]
 d1gzea_ :   (LEU213)  (GLY245)   [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Exoenzyme c3 |Clostridium botulinum [TaxId: 1491]
 d4h0ya2 :   (TYR379)  (ASN413)   [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |automated matches |Clostridium perfringens [TaxId: 1502]
 d1r45c_ :   (LEU212)  (LYS244)   [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Exoenzyme c3 |Clostridium botulinum C bacteriophage [TaxId: 12336]
 d2j3va1 :   (VAL183)  (GLN217)   [view usage] : d.166.1.0 |ADP-ribosylation |ADP-ribosylation |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
 d2c8bx_ :   (LEU213)  (GLY245)   [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |automated matches |Clostridium botulinum [TaxId: 29342]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.50,    b.40,   d.166