Tableau information
Concept source: d3i4ia_ amino acid (a.a.) range (PRO104)(PRO155)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO104) (LYS115) E1
(THR118) (ASN127) E2
(HIS132) (ASP137) E3
(TYR149) (PRO155) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 163.1° E2
E3 -28.7° 167.5° E3
E4 159.7° -24.3° 151.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1lyqb_ : (ALA1) (SER27) [view usage] : b.1.18.17 |Immunoglobulin-like beta-sandwich |E set domains |Copper resistance protein C (CopC, PcoC) |Copper resistance protein C (CopC, PcoC) |Escherichia coli [TaxId: 562]
d1j4tb_ : (GLU77) (ILE124) [view usage] : b.77.3.1 |beta-Prism I |Mannose-binding lectins |Mannose-binding lectins |Artocarpin |Jackfruit (Artocarpus heterophyllus) [TaxId: 3489]
d1ouwc_ : (THR84) (SER124) [view usage] : b.77.3.1 |beta-Prism I |Mannose-binding lectins |Mannose-binding lectins |Calystegia sepium agglutinin |Hedge bindweed (Calystegia sepium) [TaxId: 47519]
d1gpwd_ : (ASN124) (ASP159) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF |Thermotoga maritima [TaxId: 2336]
d1ha4a_ : (GLY129) (GLU172) [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |gamma-Crystallin |Human (Homo sapiens) [TaxId: 9606]
d1qzra2 : (GLU155) (LYS200) [view usage] : d.122.1.2 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |DNA gyrase/MutL, N-terminal domain |DNA topoisomerase II |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4jbmb2 : (GLN119) (GLU154) [view usage] : b.40.16.0 |OB-fold |HIN-2000 domain-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2z21a_ : (ASN10) (LEU63) [view usage] : b.89.1.1 |Cyanovirin-N |Cyanovirin-N |Cyanovirin-N |automated matches |Nostoc ellipsosporum [TaxId: 45916]
d2j01d2 : (ILE75) (GLY120) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |N-terminal domain of ribosomal protein L2 |Thermus thermophilus [TaxId: 274]
d3ba0a2 : (ASP381) (ALA431) [view usage] : b.66.1.0 |4-bladed beta-propeller |Hemopexin-like domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1w99a2 : (TYR379) (GLY425) [view usage] : b.77.2.1 |beta-Prism I |delta-Endotoxin (insectocide), middle domain |delta-Endotoxin (insectocide), middle domain |delta-Endotoxin (insectocide), middle domain |Bacillus thuringiensis, Cry4Ba [TaxId: 1428]
d1bt4a_ : (ILE137) (MET174) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Phosphoserine aminotransferase, PSAT |Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
d1kxjb_ : (ASN124) (ASP159) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF |Thermotoga maritima [TaxId: 2336]
d1rl2a2 : (ILE73) (GLY118) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |N-terminal domain of ribosomal protein L2 |Bacillus stearothermophilus [TaxId: 1422]
d1j4sa_ : (GLU77) (ILE124) [view usage] : b.77.3.1 |beta-Prism I |Mannose-binding lectins |Mannose-binding lectins |Artocarpin |Jackfruit (Artocarpus heterophyllus) [TaxId: 3489]
d1v7va2 : (SER173) (GLN212) [view usage] : b.30.5.3 |Supersandwich |Galactose mutarotase-like |Glycosyltransferase family 36 N-terminal domain |Chitobiose phosphorylase ChbP |Vibrio proteolyticus [TaxId: 671]
d2h0bd_ : (TYR330) (ASN375) [view usage] : b.29.1.4 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Laminin G-like module |Ligand-binding domain of neurexin 1beta |Cow (Bos taurus) [TaxId: 9913]
d1kija2 : (GLU127) (PHE170) [view usage] : d.122.1.2 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |DNA gyrase/MutL, N-terminal domain |DNA gyrase B |Thermus thermophilus [TaxId: 274]
d1c04a_ : (ILE73) (GLY118) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Prokaryotic (50S subunit) |Haloarcula marismortui [TaxId: 2238]
d2gtya1 : (SER59) (ASN97) [view usage] : b.77.3.1 |beta-Prism I |Mannose-binding lectins |Mannose-binding lectins |Griffithsin |Red alga (Griffithsia) [TaxId: 35158]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67, i.1, b.29, b.30, d.122, c.23, b.40, b.1, b.77, b.11, b.66, b.89