Tableau information
Concept source: d1u0aa_ amino acid (a.a.) range (THR116)(VAL160)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR116) (ASN125) E1
(GLY129) (SER135) E2
(THR146) (GLN152) E3
(TYR155) (VAL160) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 163.3° E2
E3 -24.2° 146.8° E3
E4 159.0° -27.2° 173.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3e60a2 : (ASN367) (ARG417) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Bartonella henselae [TaxId: 38323]
d2uwaa_ : (SER38) (SER79) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Tropaeolum majus [TaxId: 4020]
d1i5pa2 : (GLU396) (PRO430) [view usage] : b.77.2.1 |beta-Prism I |delta-Endotoxin (insectocide), middle domain |delta-Endotoxin (insectocide), middle domain |delta-Endotoxin (insectocide), middle domain |Bacillus thuringiensis subsp. kurstaki, CRY2AA [TaxId: 29339]
d1vs5c2 : (LYS146) (PHE202) [view usage] : d.53.1.1 |Ribosomal protein S3 C-terminal domain |Ribosomal protein S3 C-terminal domain |Ribosomal protein S3 C-terminal domain |Ribosomal protein S3 C-terminal domain |Escherichia coli [TaxId: 562]
d1gixf_ : (LYS147) (PHE203) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |70S ribosome functional complex |Thermus thermophilus [TaxId: 274]
d1zhib1 : (LYS572) (ASP610) [view usage] : d.339.1.1 |ORC1-binding domain |ORC1-binding domain |ORC1-binding domain |Regulatory protein SIR1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2fhra1 : (GLN524) (VAL561) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Trypanosoma rangeli [TaxId: 5698]
d2i9bf2 : (CYS24) (GLY72) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |Urokinase plasminogen activator surface receptor uPAR |Human (Homo sapiens) [TaxId: 9606]
d1fjgc2 : (GLY148) (PHE203) [view usage] : d.53.1.1 |Ribosomal protein S3 C-terminal domain |Ribosomal protein S3 C-terminal domain |Ribosomal protein S3 C-terminal domain |Ribosomal protein S3 C-terminal domain |Thermus thermophilus [TaxId: 274]
d1ug4a_ : (CYS21) (CYS53) [view usage] : g.7.1.1 |Snake toxin-like |Snake toxin-like |Snake venom toxins |automated matches |Chinese cobra (Naja atra) [TaxId: 8656]
d1nkw1_ : (LYS11) (LYS53) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Prokaryotic (50S subunit) |Deinococcus radiodurans [TaxId: 1299]
d4hhyd2 : (ASN300) (LYS343) [view usage] : d.166.1.0 |ADP-ribosylation |ADP-ribosylation |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1n1sa1 : (GLN527) (VAL564) [view usage] : b.29.1.15 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Trypanosoma sialidase, C-terminal domain |Trypanosoma sialidase, C-terminal domain |Trypanosoma rangeli [TaxId: 5698]
d1i8na_ : (TYR85) (ALA123) [view usage] : g.10.1.2 |Hairpin loop containing domain-like |Hairpin loop containing domain-like |Anti-platelet protein |Anti-platelet protein |Mexican leech (Haementeria officinalis) [TaxId: 6410]
d1p6gc_ : (GLY147) (GLY204) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |70S ribosome functional complex |Escherichia coli [TaxId: 562]
d1f15b_ : (PRO149) (GLN208) [view usage] : b.121.4.5 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Bromoviridae-like VP |Cucumovirus coat protein |CMV (Cucumber mosaic virus), strain fny [TaxId: 12305]
d2agsa1 : (GLN524) (VAL561) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Trypanosoma rangeli [TaxId: 5698]
d3c49a2 : (GLN481) (HIS532) [view usage] : d.166.1.0 |ADP-ribosylation |ADP-ribosylation |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1a26a2 : (THR961) (LYS1010) [view usage] : d.166.1.2 |ADP-ribosylation |ADP-ribosylation |Poly(ADP-ribose) polymerase, C-terminal domain |Poly(ADP-ribose) polymerase, C-terminal domain |Chicken (Gallus gallus) [TaxId: 9031]
d2h5fa1 : (PRO6) (CYS53) [view usage] : g.7.1.1 |Snake toxin-like |Snake toxin-like |Snake venom toxins |Denmotoxin |Mangrove snake (Boiga dendrophila) [TaxId: 46286]
d1dg4a_ : (LEU397) (ASN432) [view usage] : b.130.1.1 |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |Heat shock protein 70kD (HSP70), peptide-binding domain |DnaK |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
i.1, b.29, d.166, c.95, b.121, b.77, g.10, b.130, g.7, d.53, d.339