Tableau information
Concept source: d1f28a_ amino acid (a.a.) range (LEU155)(ASP202)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU155) (ALA159) E1
(MET175) (VAL181) E2
(ARG189) (ARG199) E3
(ARG199) (ASP202) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 164.8° E2
E3 -31.5° 163.2° E3
E4 45.0° -123.8° 66.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3ub5a1 : (ALA6) (PRO38) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Cow (Bos taurus) [TaxId: 9913]
d4eepa_ : (ARG450) (VAL496) [view usage] : d.110.3.6 |Profilin-like |PYP-like sensor domain (PAS domain) |Flavin-binding PAS domain |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1c82a3 : (THR541) (ASN580) [view usage] : b.30.5.2 |Supersandwich |Galactose mutarotase-like |Hyaluronate lyase-like, central domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1lcub1 : (THR1016) (PRO1048) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d3da0b2 : (PRO63) (ASN97) [view usage] : b.21.1.0 |Virus attachment protein globular domain |Virus attachment protein globular domain |automated matches |automated matches |Lactococcus phage [TaxId: 35345]
d1zrua1 : (PRO162) (ASN196) [view usage] : b.21.1.3 |Virus attachment protein globular domain |Virus attachment protein globular domain |Lactophage receptor-binding protein head domain |receptor binding protein, rbp, C-terminal domain |Lactococcus lactis phage p2 [TaxId: 100641]
d2nn6i1 : (SER76) (ALA130) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |Exosome component 1, EXOSC1 |Human (Homo sapiens) [TaxId: 9606]
d4nqra_ : (GLY374) (GLU404) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Anabaena variabilis [TaxId: 240292]
d4obba_ : (GLY374) (GLU404) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Anabaena variabilis [TaxId: 240292]
d2r73b_ : (ASP98) (GLU138) [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Trichosurus vulpecula [TaxId: 9337]
d1ojoa3 : (THR541) (ASN580) [view usage] : b.30.5.2 |Supersandwich |Galactose mutarotase-like |Hyaluronate lyase-like, central domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d4jhda1 : (VAL5) (PRO38) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1sr3a_ : (SER70) (GLY113) [view usage] : b.40.9.1 |OB-fold |Heme chaperone CcmE |Heme chaperone CcmE |Heme chaperone CcmE |Escherichia coli [TaxId: 562]
d1j6qa_ : (SER70) (GLY114) [view usage] : b.40.9.1 |OB-fold |Heme chaperone CcmE |Heme chaperone CcmE |Heme chaperone CcmE |Shewanella putrefaciens [TaxId: 24]
d1kb5a_ : (ASP54) (PRO82) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Mouse (Mus musculus), alpha-chain [TaxId: 10090]
d1figl1 : (SER52) (ALA80) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 3.1 [TaxId: 10090]
d1mwka1 : (MET1) (GLU35) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Plasmid segregation protein ParM |Escherichia coli [TaxId: 562]
d1k24a_ : (ASN8) (GLU67) [view usage] : f.4.4.2 |Transmembrane beta-barrels |OMPT-like |Outer membrane adhesin/invasin OpcA |Outer membrane adhesin/invasin OpcA |Neisseria meningitidis [TaxId: 487]
d1b8oa_ : (GLN44) (MET87) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Cow (Bos taurus) [TaxId: 9913]
d2bsea_ : (PRO162) (ASN196) [view usage] : b.21.1.3 |Virus attachment protein globular domain |Virus attachment protein globular domain |Lactophage receptor-binding protein head domain |receptor binding protein, rbp, C-terminal domain |Lactococcus lactis phage p2 [TaxId: 100641]
d4g9uc_ : (ILE171) (ASP212) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Trichinella spiralis [TaxId: 6334]
d1t23a_ : (LEU47) (LEU92) [view usage] : d.247.1.1 |Chromosomal protein MC1 |Chromosomal protein MC1 |Chromosomal protein MC1 |Chromosomal protein MC1 |Methanosarcina thermophila [TaxId: 2210]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.30, c.56, d.117, c.93, f.4, b.40, c.55, b.60, b.1, d.110, b.21, d.247