Tableau information
Concept source: d1bpoa2 amino acid (a.a.) range (GLY179)(VAL220)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY179) (SER185) E1
(LYS189) (PRO193) E2
(HIS197) (GLN203) E3
(THR214) (VAL220) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 162.4° E2
E3 -29.3° 142.4° E3
E4 -164.8° -22.6° 164.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2j8ba_ : (MET0) (LYS38) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |CD59 |Human (Homo sapiens) [TaxId: 9606]
d2hi2a_ : (LYS105) (ASP135) [view usage] : d.24.1.1 |Pili subunits |Pili subunits |Pilin |automated matches |Neisseria gonorrhoeae [TaxId: 485]
d1nuza_ : (CYS1092) (GLY1122) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Fructose-1,6-bisphosphatase |Pig (Sus scrofa) [TaxId: 9823]
d2pjyb_ : (LYS23) (VAL77) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |TGF-beta type II receptor extracellular domain |Human (Homo sapiens) [TaxId: 9606]
d3u5eh_ : (GLY108) (SER147) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d2h5fb_ : (PRO6) (CYS53) [view usage] : g.7.1.1 |Snake toxin-like |Snake toxin-like |Snake venom toxins |automated matches |Mangrove snake (Boiga dendrophila) [TaxId: 46286]
d1ivta_ : (GLN493) (SER546) [view usage] : b.1.16.1 |Immunoglobulin-like beta-sandwich |Lamin A/C globular tail domain |Lamin A/C globular tail domain |Lamin A/C globular tail domain |Human (Homo sapiens) [TaxId: 9606]
d3kfde_ : (LYS23) (VAL77) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |TGF-beta type II receptor extracellular domain |Human (Homo sapiens) [TaxId: 9606]
d1nuwa_ : (CYS1092) (GLY1122) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Fructose-1,6-bisphosphatase |Pig (Sus scrofa) [TaxId: 9823]
d1pm4a_ : (ASN17) (GLY68) [view usage] : b.135.1.1 |Superantigen (mitogen) Ypm |Superantigen (mitogen) Ypm |Superantigen (mitogen) Ypm |Superantigen (mitogen) Ypm |Yersinia pseudotuberculosis [TaxId: 633]
d2ofsa_ : (PHE0) (LYS38) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |CD59 |Human (Homo sapiens) [TaxId: 9606]
d1xnva1 : (SER60) (THR107) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Propionyl-CoA carboxylase complex B subunit, PccB |Streptomyces coelicolor [TaxId: 1902]
d3u73u2 : (CYS122) (CYS171) [view usage] : g.7.1.0 |Snake toxin-like |Snake toxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3kzua2 : (ASN367) (ARG417) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Brucella melitensis [TaxId: 29459]
d2cdxa_ : (LEU1) (ASN55) [view usage] : g.7.1.1 |Snake toxin-like |Snake toxin-like |Snake venom toxins |Cardiotoxin CTXI |Taiwan cobra (Naja naja atra) [TaxId: 8656]
d2uwra_ : (MET0) (LYS38) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |CD59 |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.69, i.1, c.14, c.95, e.7, b.1, d.24, g.7, b.135