Tableau information
Concept source: d1mz5a2 amino acid (a.a.) range (GLU222)(SER258)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU222) (LYS226) E1
(GLU231) (GLU236) E2
(GLY239) (GLY249) E3
(ARG252) (SER258) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 126.0° E2
E3 -35.9° 161.9° E3
E4 158.1° -36.8° 159.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2co0c_ : (VAL294) (ASP333) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1dypa_ : (HIS205) (ASP243) [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |kappa-Carrageenase, catalytic |Pseudoalteromonas carrageenovora [TaxId: 227]
d3k5la1 : (HIS0) (ALA37) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]
d2owna2 : (VAL202) (GLU258) [view usage] : d.38.1.8 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |Acyl-ACP thioesterase-like |Putative oleoyl-ACP thioesterase LP0708 |Lactobacillus plantarum [TaxId: 1590]
d1w6sc_ : (TRP2467) (ASP2500) [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Methanol dehydrogenase, heavy chain |Methylobacterium extorquens [TaxId: 408]
d4bh6a_ : (TYR252) (ASP289) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1pj5a3 : (HIS225) (SER271) [view usage] : d.16.1.5 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |L-aminoacid/polyamine oxidase |N,N-dimethylglycine oxidase |Arthrobacter globiformis [TaxId: 1665]
d2ffka_ : (GLY25) (THR95) [view usage] : b.27.1.1 |Soluble secreted chemokine inhibitor, VCCI |Soluble secreted chemokine inhibitor, VCCI |Soluble secreted chemokine inhibitor, VCCI |automated matches |Rabbitpox virus [TaxId: 32606]
d1q4ub_ : (GLN94) (PRO148) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |4-hydroxybenzoyl CoA thioesterase |Arthrobacter sp., strain su [TaxId: 1667]
d3r3ab_ : (GLN94) (ARG147) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |automated matches |Arthrobacter sp. [TaxId: 1667]
d1y4wa2 : (VAL227) (GLY282) [view usage] : b.67.2.3 |5-bladed beta-propeller |Arabinanase/levansucrase/invertase |Glycosyl hydrolases family 32 N-terminal domain |Exo-inulinase |Aspergillus awamori [TaxId: 105351]
d1lnza1 : (PHE2) (GLU50) [view usage] : b.117.1.1 |Obg-fold |Obg GTP-binding protein N-terminal domain |Obg GTP-binding protein N-terminal domain |Obg GTP-binding protein N-terminal domain |Bacillus subtilis [TaxId: 1423]
d1ynjd1 : (PRO248) (ALA286) [view usage] : e.29.1.2 |beta and beta-prime subunits of DNA dependent RNA-polymerase |beta and beta-prime subunits of DNA dependent RNA-polymerase |RNA-polymerase beta-prime |RNA-polymerase beta-prime |Thermus aquaticus [TaxId: 271]
d4bh6e_ : (TYR252) (ASP289) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ng3a2 : (LEU220) (PRO263) [view usage] : d.16.1.3 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |D-aminoacid oxidase-like |Glycine oxidase ThiO |Bacillus sp. [TaxId: 1409]
d1ryia2 : (LEU220) (PRO263) [view usage] : d.16.1.3 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |D-aminoacid oxidase-like |Glycine oxidase ThiO |Bacillus sp. [TaxId: 1409]
d2h68a_ : (VAL294) (SER332) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4bh6h_ : (TYR252) (ASP289) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3krwb_ : (ALA305) (ASN340) [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |beta1-subunit of the signal-transducing G protein heterotrimer |Cow (Bos taurus) [TaxId: 9913]
d4ffva1 : (HIS343) (GLN386) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2g99a_ : (VAL294) (ASP333) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1c7sa2 : (ASP84) (PRO117) [view usage] : b.2.2.3 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Bacterial chitobiase, n-terminal domain |Bacterial chitobiase, n-terminal domain |Serratia marcescens [TaxId: 615]
d3ah8b_ : (ALA305) (ASN340) [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |beta1-subunit of the signal-transducing G protein heterotrimer |Cow (Bos taurus) [TaxId: 9913]
d1p22a2 : (LEU463) (ASP496) [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |F-box/WD-repeat protein 1 (beta-TRCP1) |Human (Homo sapiens) [TaxId: 9606]
d1p22a2 : (LEU512) (ASP545) [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |F-box/WD-repeat protein 1 (beta-TRCP1) |Human (Homo sapiens) [TaxId: 9606]
d4bh6g_ : (TYR252) (ASP289) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3srga_ : (VAL320) (CYS353) [view usage] : b.68.6.2 |6-bladed beta-propeller |Calcium-dependent phosphotriesterase |Serum paraoxonase/arylesterase 1, PON1 |Serum paraoxonase/arylesterase 1, PON1 |Artificial gene [TaxId: 32630]
d2co0a_ : (VAL294) (SER332) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1qtja_ : (UNK86) (UNK127) [view usage] : i.12.1.1 |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Serum amyloid P component, SAP |Horseshoe crab (Limulus polyphemus) [TaxId: 6850]
d2ymza_ : (GLN67) (PRO106) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d2h4ua1 : (VAL84) (GLY139) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein Them2 |Human (Homo sapiens) [TaxId: 9606]
d1a12a_ : (VAL164) (GLY197) [view usage] : b.69.5.1 |7-bladed beta-propeller |RCC1/BLIP-II |Regulator of chromosome condensation RCC1 |Regulator of chromosome condensation RCC1 |Human (Homo sapiens) [TaxId: 9606]
d1yoca1 : (ARG89) (GLN144) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein PA1835 |Pseudomonas aeruginosa [TaxId: 287]
d1c0ia2 : (ALA1194) (GLY1241) [view usage] : d.16.1.3 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |D-aminoacid oxidase-like |D-aminoacid oxidase |Rhodotorula gracilis [TaxId: 5286]
d4gm9b_ : (VAL294) (ASP333) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1cvma_ : (ALA42) (SER84) [view usage] : b.68.3.1 |6-bladed beta-propeller |Thermostable phytase (3-phytase) |Thermostable phytase (3-phytase) |Thermostable phytase (3-phytase) |Bacillus amyloliquefaciens [TaxId: 1390]
d3j3ag_ : (VAL267) (VAL312) [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |Guanine nucleotide-binding protein subunit beta-2-like 1 (GNB2L1 or RACK1) |Human (Homo sapiens) [TaxId: 9606]
d3wz1a_ : (TRP191) (SER230) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Microbulbifer thermotolerans [TaxId: 252514]
d1i8ta2 : (TYR246) (PRO300) [view usage] : d.16.1.7 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |UDP-galactopyranose mutase |UDP-galactopyranose mutase |Escherichia coli [TaxId: 562]
d4bh6d_ : (TYR252) (ASP289) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1gg2b_ : (ALA305) (ASN340) [view usage] : b.69.4.1 |7-bladed beta-propeller |WD40 repeat-like |WD40-repeat |beta1-subunit of the signal-transducing G protein heterotrimer |Cow (Bos taurus) [TaxId: 9913]
d1vh5a_ : (GLU77) (GLU137) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein YdiI |Escherichia coli [TaxId: 562]
d2gf6d_ : (TRP56) (ALA112) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 2287]
d3n0ea_ : (LYS38) (GLY73) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1tg7a4 : (LEU488) (SER521) [view usage] : b.71.1.5 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |Beta-galactosidase LacA, domain 2 |Beta-galactosidase LacA, domain 2 |Penicillium sp. [TaxId: 5081]
d1an9a2 : (LEU195) (GLY245) [view usage] : d.16.1.3 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |D-aminoacid oxidase-like |D-aminoacid oxidase |Pig (Sus scrofa) [TaxId: 9823]
d2bi7a2 : (ARG250) (ARG304) [view usage] : d.16.1.7 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |UDP-galactopyranose mutase |UDP-galactopyranose mutase |Klebsiella pneumoniae [TaxId: 573]
d1h54b2 : (ARG214) (THR264) [view usage] : b.30.5.3 |Supersandwich |Galactose mutarotase-like |Glycosyltransferase family 36 N-terminal domain |Lactobacillus maltose phosphorylase, N-terminal domain |Lactobacillus brevis [TaxId: 1580]
d2qwza_ : (GLU76) (PRO138) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Silicibacter sp. [TaxId: 292414]
d2jxmb1 : (ASN171) (SER206) [view usage] : i.4.1.1 |Electron transport chains |Electron transport chains |Electron transport chains |Cytochrome f-plastocyanin complex |Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
d4gmba_ : (VAL294) (SER332) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ownb2 : (VAL202) (PRO257) [view usage] : d.38.1.8 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |Acyl-ACP thioesterase-like |Putative oleoyl-ACP thioesterase LP0708 |Lactobacillus plantarum [TaxId: 1590]
d1vi8b_ : (GLU77) (HIS144) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein YdiI |Escherichia coli [TaxId: 562]
d1bdoa_ : (GLY80) (ALA129) [view usage] : b.84.1.1 |Barrel-sandwich hybrid |Single hybrid motif |Biotinyl/lipoyl-carrier proteins and domains |Biotinyl domain of acetyl-CoA carboxylase |Escherichia coli [TaxId: 562]
d1wama2 : (ARG250) (ARG304) [view usage] : d.16.1.7 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |UDP-galactopyranose mutase |UDP-galactopyranose mutase |Klebsiella pneumoniae [TaxId: 573]
d3mxxa_ : (VAL294) (ASP333) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nija1 : (ASN38) (SER68) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Hypothetical protein YjiA, N-terminal domain |Escherichia coli [TaxId: 562]
d1a78a_ : (SER71) (PRO110) [view usage] : b.29.1.3 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Galectin (animal S-lectin) |Galectin-1 |Toad (Bufo arenarum) [TaxId: 38577]
d2qwzc_ : (GLU76) (PRO138) [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Silicibacter sp. [TaxId: 292414]
d4e8ga2 : (GLY319) (GLY349) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Paracoccus denitrificans [TaxId: 318586]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.70, c.1, b.69, b.29, b.67, b.30, c.37, c.55, b.2, d.38, b.84, i.12, d.16, b.71, b.27, i.4, e.29, b.117