Tableau information
Concept source: d3zzca_ amino acid (a.a.) range (GLY148)(ALA172)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY148) (THR154) E1
(GLY155) (GLY159) E2
(VAL162) (GLY166) E3
(HIS167) (ALA172) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 147.2° E2
E3 87.8° 77.1° E3
E4 -89.0° 97.2° 163.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3zyea_ : (GLY148) (ALA172) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Human coxsackievirus B3 [TaxId: 12072]
d3ruoa_ : (GLY148) (ALA172) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human enterovirus b [TaxId: 138949]
d3ob9b_ : (VAL17) (ASN57) [view usage] : b.34.13.0 |SH3-like barrel |Chromo domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2xyaa_ : (GLY148) (ARG176) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human rhinovirus sp. [TaxId: 169066]
d1sgca_ : (GLU29) (ALA55) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Protease A |Streptomyces griseus, strain k1 [TaxId: 1911]
d1xnia2 : (VAL1544) (GLU1573) [view usage] : b.34.9.1 |SH3-like barrel |Tudor/PWWP/MBT |Tudor domain |p53-binding protein 1, 53BP1 |Human (Homo sapiens) [TaxId: 9606]
d1te0a2 : (VAL154) (ASP193) [view usage] : b.47.1.1 |Trypsin-like serine proteases |Trypsin-like serine proteases |Prokaryotic proteases |Stress sensor protease DegS, catalytic domain |Escherichia coli [TaxId: 562]
d3zzca_ : (GLY148) (ALA172) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Human coxsackievirus [TaxId: 12072]
d2z9ka_ : (GLN127) (TYR161) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |SARS coronavirus [TaxId: 227859]
d3u5ew_ : (MET1) (GLN32) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d2e0ma_ : (HIS80) (GLU125) [view usage] : d.5.1.1 |RNase A-like |RNase A-like |Ribonuclease A-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3q3ya_ : (GLY148) (ALA172) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human enterovirus b [TaxId: 138949]
d2zu1a_ : (GLY148) (ALA172) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Human coxsackievirus B3 [TaxId: 12072]
d1f60a1 : (MET274) (LYS311) [view usage] : b.43.3.1 |Reductase/isomerase/elongation factor common domain |Translation proteins |Elongation factors |Elongation factor eEF-1alpha, domain 2 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1rrpb_ : (LYS46) (ARG82) [view usage] : b.55.1.3 |PH domain-like barrel |PH domain-like |Ran-binding domain |Nuclear pore complex protein Nup358 |Human (Homo sapiens) [TaxId: 9606]
d2qgga1 : (LEU43) (GLY74) [view usage] : b.43.3.0 |Reductase/isomerase/elongation factor common domain |Translation proteins |automated matches |automated matches |Acinetobacter calcoaceticus [TaxId: 471]
d3h3xq_ : (GLY314) (TYR376) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |automated matches |Desulfovibrio fructosovorans [TaxId: 878]
d1loxa2 : (GLU23) (LYS50) [view usage] : b.12.1.1 |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipase/lipooxygenase domain (PLAT/LH2 domain) |Lipoxigenase N-terminal domain |15-Lipoxygenase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d3sjoa_ : (GLY148) (ARG176) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human enterovirus 71 [TaxId: 39054]
d1azza_ : (GLY196) (THR229) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Crab collagenase |Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]
d1hage_ : (GLY196) (THR229) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Thrombin |Human (Homo sapiens) [TaxId: 9606]
d1jx1c_ : (ALA17) (GLU55) [view usage] : d.36.1.1 |Chalcone isomerase |Chalcone isomerase |Chalcone isomerase |Chalcone isomerase |Alfalfa (Medicago sativa) [TaxId: 3879]
d2m68a_ : (CYS1516) (ILE1552) [view usage] : b.64.1.1 |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2g9da1 : (MSE259) (GLY294) [view usage] : c.56.5.7 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |AstE/AspA-like |Succinylglutamate desuccinylase AstE |Vibrio cholerae [TaxId: 666]
d3zyda_ : (GLY148) (ALA172) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Human coxsackievirus B3 [TaxId: 12072]
d1l1na_ : (GLY148) (ARG176) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |3C cysteine protease (picornain 3C) |Human poliovirus 1 Mahoney [TaxId: 12081]
d4a17t_ : (ARG4) (LEU34) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
d2ztxa_ : (GLY149) (LYS176) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |Human coxsackievirus B3 [TaxId: 12072]
d1op8a_ : (ARG63) (LEU108) [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Granzyme A |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
i.1, b.47, c.56, e.18, b.55, b.34, d.5, b.43, b.12, b.64, d.36