Tableau information
Concept source: d2fhra2 amino acid (a.a.) range (LYS174)(ASP213)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS174) (GLY178) E1
(GLY181) (ALA186) E2
(LEU191) (ASP199) E3
(ARG203) (ASP213) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -78.6° E2
E3 148.8° 127.8° E3
E4 -59.6° -46.0° 149.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2pgwa1 : (ASN8) (PRO55) [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d2dmka_ : (THR14) (ILE54) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1kiub2 : (CYS161) (LEU197) [view usage] : b.2.3.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Pilus subunits |Mannose-specific adhesin FimH |Escherichia coli [TaxId: 562]
d2edja_ : (PRO8) (TRP42) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2k5wa1 : (ASP12) (SER53) [view usage] : b.40.13.1 |OB-fold |BC4932-like |BC4932-like |Uncharacterized protein BC2438 |Bacillus cereus [TaxId: 1396]
d1rj7i_ : (ALA249) (LYS282) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Ectodysplasin A, Eda-a1 |Human (Homo sapiens) [TaxId: 9606]
d1uz6e1 : (ILE2) (LEU33) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]
d4loja_ : (ASN217) (PRO263) [view usage] : d.387.1.1 |STING C-terminal-like |STING, TM173 CTD-like |Tyrosinase cofactor MelC1 |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1rj7h_ : (ALA249) (LYS282) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Ectodysplasin A, Eda-a1 |Human (Homo sapiens) [TaxId: 9606]
d1zt4c1 : (VAL185) (TRP220) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2lt9a_ : (HIS528) (THR572) [view usage] : b.1.27.1 |Immunoglobulin-like beta-sandwich |CalX-like |CalX-beta domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1jxea1 : (ALA293) (GLU337) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Thermus aquaticus [TaxId: 271]
d1w61a_ : (VAL189) (PRO224) [view usage] : d.21.1.0 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
d3it9a2 : (PHE259) (ILE296) [view usage] : b.105.1.0 |Penicillin-binding protein associated domain |Penicillin-binding protein associated domain |automated matches |automated matches |Escherichia coli [TaxId: 562]
d3it9a2 : (LYS305) (VAL344) [view usage] : b.105.1.0 |Penicillin-binding protein associated domain |Penicillin-binding protein associated domain |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1x5fa1 : (GLY15) (LYS58) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Neogenin |Human (Homo sapiens) [TaxId: 9606]
d1jv2a1 : (PRO439) (ASP500) [view usage] : b.1.15.1 |Immunoglobulin-like beta-sandwich |Integrin domains |Integrin domains |Thigh, calf-1 and calf-2 domains of integrin alpha |Human (Homo sapiens) [TaxId: 9606]
d1co1a_ : (ASN29) (ASN69) [view usage] : b.2.5.6 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |RUNT domain |Acute myeloid leukemia 1 protein (AML1), RUNT domain |Human (Homo sapiens) [TaxId: 9606]
d1wita_ : (LYS2) (TRP36) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Twitchin |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1h6ya_ : (PRO27) (PRO62) [view usage] : b.18.1.7 |Galactose-binding domain-like |Galactose-binding domain-like |CBM22 |Xylan-binding domain |Clostridium thermocellum [TaxId: 1515]
d2heyf_ : (ILE60) (ASN91) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Tumor necrosis factor ligand superfamily member 4, OX40L |Mouse (Mus musculus) [TaxId: 10090]
d2cqva1 : (PRO8) (TRP41) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Telokin |Human (Homo sapiens) [TaxId: 9606]
d1w62b_ : (VAL189) (PRO224) [view usage] : d.21.1.0 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
d2wo4a_ : (ALA11) (LEU45) [view usage] : b.2.2.0 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |automated matches |automated matches |Clostridium thermocellum [TaxId: 1515]
d1fl3b1 : (ALA2) (LEU38) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]
d1bgxt3 : (LEU294) (GLU337) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Thermus aquaticus [TaxId: 271]
d1p0se_ : (ASN51) (ALA99) [view usage] : b.16.1.1 |Ecotin, trypsin inhibitor |Ecotin, trypsin inhibitor |Ecotin, trypsin inhibitor |Ecotin, trypsin inhibitor |Escherichia coli [TaxId: 562]
d2heyg_ : (ILE60) (ASN91) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Tumor necrosis factor ligand superfamily member 4, OX40L |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.40, c.55, b.18, b.2, b.1, d.21, b.22, d.54, b.16, d.387, b.105