Tableau information
Concept source: d1f9ka_ amino acid (a.a.) range (GLY64)(PRO96)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY64) (PHE73) E1
(SER74) (PRO80) E2
(ALA87) (PHE92) E3
(PHE92) (PRO96) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -53.9° E2
E3 129.0° 173.7° E3
E4 146.9° 113.8° -60.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4hvsa_ : (ARG588) (GLY610) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4cqha2 : (ALA182) (PRO204) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |automated matches |Deinococcus radiodurans [TaxId: 1299]
d2ewoh_ : (PRO280) (TYR308) [view usage] : d.126.1.0 |Pentein, beta/alpha-propeller |Pentein |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
d2cwma_ : (ALA189) (ASN216) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Canavalia maritima [TaxId: 3825]
d1ynjd1 : (HIS316) (PRO349) [view usage] : e.29.1.2 |beta and beta-prime subunits of DNA dependent RNA-polymerase |beta and beta-prime subunits of DNA dependent RNA-polymerase |RNA-polymerase beta-prime |RNA-polymerase beta-prime |Thermus aquaticus [TaxId: 271]
d4ijga2 : (ALA182) (PRO204) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |Bacteriophytochrome BphP |Deinococcus radiodurans [TaxId: 243230]
d1an8a2 : (LYS97) (GLU123) [view usage] : d.15.6.1 |beta-Grasp (ubiquitin-like) |Superantigen toxins, C-terminal domain |Superantigen toxins, C-terminal domain |Streptococcal superantigen Spe-C |Streptococcus pyogenes [TaxId: 1314]
d1by5a_ : (GLY421) (ASN462) [view usage] : f.4.3.3 |Transmembrane beta-barrels |Porins |Ligand-gated protein channel |Ferric hydroxamate uptake receptor FhuA |Escherichia coli [TaxId: 562]
d1by5a_ : (GLY466) (LYS508) [view usage] : f.4.3.3 |Transmembrane beta-barrels |Porins |Ligand-gated protein channel |Ferric hydroxamate uptake receptor FhuA |Escherichia coli [TaxId: 562]
d3pf1a_ : (GLY119) (PHE158) [view usage] : f.4.3.4 |Transmembrane beta-barrels |Porins |Outer membrane protein transport protein |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3pf1a_ : (ILE197) (LEU243) [view usage] : f.4.3.4 |Transmembrane beta-barrels |Porins |Outer membrane protein transport protein |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2ovua_ : (ALA189) (ASN216) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Canavalia gladiata [TaxId: 3824]
d1ks4a_ : (SER41) (ASN69) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Family 12 endo-1,4-beta-glucanase (cellulase) catalytic domain |Aspergillus niger [TaxId: 5061]
d4bgdc_ : (ILE2201) (VAL2233) [view usage] : c.97.3.0 |Cytidine deaminase-like |JAB1/MPN domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3do7a1 : (ASN242) (LYS274) [view usage] : b.2.5.3 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |Rel/Dorsal transcription factors, DNA-binding domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3a0ke_ : (ALA189) (ASN216) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Cymbosema roseum [TaxId: 202239]
d3i5va_ : (LYS258) (SER292) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 561307]
d1h4hd_ : (LYS175) (ILE201) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus agaradhaerens [TaxId: 76935]
d1h4ga_ : (LYS175) (ILE201) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus agaradhaerens [TaxId: 76935]
d3j38b_ : (ARG85) (ASP111) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
d3b7ma_ : (ASN42) (GLN68) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |automated matches |Rhodothermus marinus [TaxId: 29549]
d3gzxb_ : (ARG107) (LEU139) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |automated matches |Comamonas testosteroni [TaxId: 285]
d1zvka_ : (ALA189) (GLY220) [view usage] : c.41.1.2 |Subtilisin-like |Subtilisin-like |Serine-carboxyl proteinase, SCP |automated matches |Alicyclobacillus sendaiensis [TaxId: 192387]
d3g0ea_ : (ARG588) (GLY610) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |c-KIT receptor |Human (Homo sapiens) [TaxId: 9606]
d1h4ha_ : (LYS175) (ILE201) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus agaradhaerens [TaxId: 76935]
d1h4gb_ : (LYS175) (ILE201) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus agaradhaerens [TaxId: 76935]
d1f9ka_ : (GLY64) (PRO96) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]
d3u5cb_ : (ARG82) (ASP108) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d3c5fa3 : (THR458) (LEU479) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase lambda |Human (Homo sapiens) [TaxId: 9606]
d1jhsa_ : (THR118) (LYS144) [view usage] : d.107.1.1 |Mog1p/PsbP-like |Mog1p/PsbP-like |Ran-binding protein mog1p |Ran-binding protein mog1p |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
i.1, b.29, f.4, d.144, d.151, b.2, d.126, c.97, d.110, d.17, c.41, d.15, d.218, d.107, e.29