Tableau information
Concept source: d1uaia_ amino acid (a.a.) range (THR133)(TYR173)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR133) (ILE137) E1
(HIS145) (THR149) E2
(PHE158) (VAL164) E3
(GLY167) (TYR173) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 139.9° E2
E3 14.8° 154.2° E3
E4 -158.4° -18.5° 172.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3hh7a_ : (THR1) (GLY40) [view usage] : g.7.1.0 |Snake toxin-like |Snake toxin-like |automated matches |automated matches |King cobra (Ophiophagus hannah) [TaxId: 8665]
d3t5pb_ : (PRO180) (LYS228) [view usage] : e.52.1.0 |NAD kinase/diacylglycerol kinase-like |NAD kinase/diacylglycerol kinase-like |automated matches |automated matches |Bacillus anthracis [TaxId: 260799]
d1xfda1 : (SER349) (ASN400) [view usage] : b.70.3.1 |8-bladed beta-propeller |DPP6 N-terminal domain-like |DPP6 N-terminal domain-like |Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1hwwa2 : (SER833) (MET865) [view usage] : b.30.5.6 |Supersandwich |Galactose mutarotase-like |alpha-mannosidase, C-terminal domain |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1gjxa_ : (ILE36) (GLU76) [view usage] : b.84.1.1 |Barrel-sandwich hybrid |Single hybrid motif |Biotinyl/lipoyl-carrier proteins and domains |Lipoyl domain of dihydrolipoamide acetyltransferase |Neisseria meningitidis [TaxId: 487]
d1vyca_ : (CYS24) (ALA59) [view usage] : g.7.1.1 |Snake toxin-like |Snake toxin-like |Snake venom toxins |Bucain |Malayan krait (Bungarus candidus) [TaxId: 92438]
d1jjua4 : (ALA427) (THR479) [view usage] : b.1.18.14 |Immunoglobulin-like beta-sandwich |E set domains |Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5 |Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5 |Paracoccus denitrificans [TaxId: 266]
d1d0na1 : (GLY40) (GLN75) [view usage] : d.109.1.1 |Gelsolin-like |Actin depolymerizing proteins |Gelsolin-like |Gelsolin |Horse (Equus caballus) [TaxId: 9796]
d1crea_ : (LEU1) (CYS38) [view usage] : g.7.1.1 |Snake toxin-like |Snake toxin-like |Snake venom toxins |Cardiotoxin II |Taiwan cobra (Naja naja atra) [TaxId: 8656]
d3bt2u1 : (SER1) (SER44) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |Urokinase plasminogen activator surface receptor uPAR |Human (Homo sapiens) [TaxId: 9606]
d1cvoa_ : (LEU21) (SER57) [view usage] : g.7.1.1 |Snake toxin-like |Snake toxin-like |Snake venom toxins |Cardiotoxin V |Taiwan cobra (Naja naja atra) [TaxId: 8656]
d1exta1 : (GLY18) (GLU54) [view usage] : g.24.1.1 |TNF receptor-like |TNF receptor-like |TNF receptor-like |Tumor necrosis factor (TNF) receptor |Human (Homo sapiens) [TaxId: 9606]
d1eraa_ : (ARG1) (ARG39) [view usage] : g.7.1.1 |Snake toxin-like |Snake toxin-like |Snake venom toxins |Erabutoxin B (also neurotoxin B) |Sea snake (Laticauda semifasciata) [TaxId: 8631]
d2f1aa2 : (GLY834) (MET865) [view usage] : b.30.5.6 |Supersandwich |Galactose mutarotase-like |alpha-mannosidase, C-terminal domain |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1fasa_ : (CYS22) (THR54) [view usage] : g.7.1.1 |Snake toxin-like |Snake toxin-like |Snake venom toxins |Fasciculin |Green mamba (Dendroaspis angusticeps) [TaxId: 8618]
d4jyza2 : (MET343) (GLY383) [view usage] : b.53.1.2 |Ribosomal protein L25-like |Ribosomal protein L25-like |Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain |Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain |Escherichia coli [TaxId: 562]
d1htya2 : (GLY834) (MSE865) [view usage] : b.30.5.6 |Supersandwich |Galactose mutarotase-like |alpha-mannosidase, C-terminal domain |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1dcza_ : (LEU83) (GLY123) [view usage] : b.84.1.1 |Barrel-sandwich hybrid |Single hybrid motif |Biotinyl/lipoyl-carrier proteins and domains |Biotin carboxyl carrier domain of transcarboxylase (TC 1.3S) |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
d3bi9x_ : (SER74) (ARG111) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1cb9a_ : (LEU1) (CYS38) [view usage] : g.7.1.1 |Snake toxin-like |Snake toxin-like |Snake venom toxins |Cardiotoxin II |Central asian cobra (Naja naja oxiana) [TaxId: 8657]
d1o78a_ : (LEU44) (GLY84) [view usage] : b.84.1.1 |Barrel-sandwich hybrid |Single hybrid motif |Biotinyl/lipoyl-carrier proteins and domains |Biotin carboxyl carrier domain of transcarboxylase (TC 1.3S) |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
d1extb1 : (GLY18) (ARG53) [view usage] : g.24.1.1 |TNF receptor-like |TNF receptor-like |TNF receptor-like |Tumor necrosis factor (TNF) receptor |Human (Homo sapiens) [TaxId: 9606]
d1tnrr1 : (GLY18) (GLU54) [view usage] : g.24.1.1 |TNF receptor-like |TNF receptor-like |TNF receptor-like |Tumor necrosis factor (TNF) receptor |Human (Homo sapiens) [TaxId: 9606]
d2goob_ : (PHE35) (GLY76) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |BMP receptor Ia ectodomain |Human (Homo sapiens) [TaxId: 9606]
d2h7za1 : (THR8) (CYS51) [view usage] : g.7.1.1 |Snake toxin-like |Snake toxin-like |Snake venom toxins |Irditoxin subunit A |Brown tree snake (Boiga irregularis) [TaxId: 92519]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.70, b.29, b.30, b.1, b.84, d.109, e.52, g.7, b.53, g.24