Protein Concepts Dictionary

Tableau information

Concept source:  d2jg1a_  amino acid (a.a.) range (MSE1)(GLN29)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: EEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (MSE1)    (LEU7) E1
	    (LEU7)   (LEU17) E2
	   (ALA19)   (ASP23) E3
	   (ASP24)   (GLN29) E4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                          
E2       70.0°   E2                   
E3      -38.1°  104.2°   E3            
E4     -158.0°   98.9° -136.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2jg1a_ :     (MSE1)   (GLN29)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
 d2jgvb_ :     (MSE1)   (GLN29)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
 d2awdb_ :     (SER0)   (SER29)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Enterococcus faecalis [TaxId: 1351]
 d2q5ra_ :     (MSE1)   (GLN29)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
 d3q1ya_ :    (LEU-1)   (LYS31)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Listeria innocua [TaxId: 1642]
 d3ie7a_ :    (LEU-1)   (LYS31)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Listeria innocua [TaxId: 1642]
 d2f02b_ :     (SER0)   (SER29)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Enterococcus faecalis [TaxId: 226185]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.72