Tableau information
Concept source: d1dkga1 amino acid (a.a.) range (ALA158)(ALA195)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA158) (SER162) E1
(LEU171) (GLN175) E2
(GLN175) (ASN181) E3
(ILE185) (ALA195) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 145.4° E2
E3 -110.7° -73.6° E3
E4 -39.2° 155.7° -130.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4kkfa_ : (LYS448) (ALA481) [view usage] : a.102.1.0 |alpha/alpha toroid |Six-hairpin glycosidases |automated matches |automated matches |Clostridium cellulovorans [TaxId: 1493]
d1kzqa1 : (GLY92) (VAL128) [view usage] : b.6.2.1 |Cupredoxin-like |Major surface antigen p30, SAG1 |Major surface antigen p30, SAG1 |Major surface antigen p30, SAG1 |Toxoplasma gondii [TaxId: 5811]
d1dkga1 : (ALA158) (ALA195) [view usage] : b.73.1.1 |Head domain of nucleotide exchange factor GrpE |Head domain of nucleotide exchange factor GrpE |Head domain of nucleotide exchange factor GrpE |Head domain of nucleotide exchange factor GrpE |Escherichia coli [TaxId: 562]
d1nepa_ : (CYS8) (THR46) [view usage] : b.1.18.7 |Immunoglobulin-like beta-sandwich |E set domains |ML domain |Epididymal secretory protein E1 (Niemann-Pick C2 protein) |Cow (Bos taurus) [TaxId: 9913]
d2p0wa_ : (ILE74) (VAL107) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Histone acetyltransferase HAT1 |Human (Homo sapiens) [TaxId: 9606]
d4lmfa3 : (LEU244) (GLY274) [view usage] : b.23.1.1 |CUB-like |Spermadhesin, CUB domain |Spermadhesin, CUB domain |Complement C1S component |Human (Homo sapiens) [TaxId: 9606]
d4h69e_ : (ASN54) (GLY95) [view usage] : b.159.1.0 |AOC barrel-like |Allene oxide cyclase-like |automated matches |automated matches |Physcomitrella patens [TaxId: 145481]
d1awwa_ : (ASN23) (LYS49) [view usage] : b.34.2.1 |SH3-like barrel |SH3-domain |SH3-domain |Bruton's tyrosine kinase |Human (Homo sapiens) [TaxId: 9606]
d2q2ga1 : (VAL44) (PRO86) [view usage] : b.4.1.0 |HSP40/DnaJ peptide-binding domain |HSP40/DnaJ peptide-binding domain |automated matches |automated matches |Cryptosporidium parvum [TaxId: 353152]
d1vboa_ : (THR118) (LEU149) [view usage] : b.77.3.1 |beta-Prism I |Mannose-binding lectins |Mannose-binding lectins |Artocarpin |Jackfruit (Artocarpus heterophyllus) [TaxId: 3489]
d4iyaa_ : (SER132) (LYS159) [view usage] : f.6.1.0 |Leukocidin-like |Leukocidin-like |automated matches |automated matches |Staphylococcus phage [TaxId: 71366]
d1uema_ : (ASP14) (THR43) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |KIAA1568 protein |Human (Homo sapiens) [TaxId: 9606]
d3rnsa1 : (LEU15) (LYS43) [view usage] : b.82.1.0 |Double-stranded beta-helix |RmlC-like cupins |automated matches |automated matches |Leptotrichia buccalis [TaxId: 523794]
d1xn5a_ : (HIS46) (ASP74) [view usage] : d.129.3.5 |TBP-like |Bet v1-like |AHSA1 domain |Hypothetical protein BH1534 |Bacillus halodurans [TaxId: 86665]
d3weaa_ : (CYS6) (VAL46) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Camponotus japonicus [TaxId: 84547]
d1jh7a_ : (LEU149) (PRO181) [view usage] : d.61.1.1 |LigT-like |LigT-like |tRNA splicing product Appr>p cyclic nucleotide phosphodiesterase |tRNA splicing product Appr>p cyclic nucleotide phosphodiesterase |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2cnya_ : (VAL106) (GLY141) [view usage] : b.2.3.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |Pilus subunits |automated matches |Salmonella typhimurium [TaxId: 90371]
d2ar6a_ : (ALA54) (PRO94) [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]
d1ghqb2 : (PRO75) (CYS99) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement receptor 2, cr2 |Human (Homo sapiens) [TaxId: 9606]
d1p35b_ : (GLY268) (ASN296) [view usage] : b.28.1.1 |Baculovirus p35 protein |Baculovirus p35 protein |Baculovirus p35 protein |Baculovirus p35 protein |AcMNPV (Autographa californica nuclear polyhedrosis virus) [TaxId: 46015]
d1dkgb1 : (ILE157) (ALA195) [view usage] : b.73.1.1 |Head domain of nucleotide exchange factor GrpE |Head domain of nucleotide exchange factor GrpE |Head domain of nucleotide exchange factor GrpE |Head domain of nucleotide exchange factor GrpE |Escherichia coli [TaxId: 562]
d4kkka_ : (LYS448) (ALA481) [view usage] : a.102.1.0 |alpha/alpha toroid |Six-hairpin glycosidases |automated matches |automated matches |Clostridium cellulovorans [TaxId: 1493]
d1o6sa1 : (ASP457) (LYS495) [view usage] : b.1.18.15 |Immunoglobulin-like beta-sandwich |E set domains |Internalin Ig-like domain |Internalin A |Listeria monocytogenes [TaxId: 1639]
d1p4ta_ : (GLU1) (ASN38) [view usage] : f.4.1.1 |Transmembrane beta-barrels |OMPA-like |Outer membrane protein |Outer membrane protein NspA |Neisseria meningitidis [TaxId: 487]
d2eiga_ : (VAL1) (TYR45) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Lotus tetragonolobus [TaxId: 3868]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.82, b.29, a.102, d.129, f.4, b.2, b.6, b.1, d.108, b.77, b.34, g.18, b.23, f.6, b.4, b.28, b.159, d.61, b.73