Tableau information
Concept source: d1tg7a3 amino acid (a.a.) range (ASP908)(PRO952)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP908) (THR919) E1
(TYR925) (VAL931) E2
(TYR936) (VAL940) E3
(THR947) (PRO952) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 166.1° E2
E3 -12.9° 172.5° E3
E4 166.1° -12.7° 174.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2jema_ : (LYS45) (ILE92) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Bacillus licheniformis [TaxId: 1402]
d1zrra_ : (GLY111) (MET144) [view usage] : b.82.1.6 |Double-stranded beta-helix |RmlC-like cupins |Acireductone dioxygenase |Acireductone dioxygenase |Klebsiella pneumoniae [TaxId: 573]
d1ahka_ : (GLY32) (PRO95) [view usage] : b.1.18.7 |Immunoglobulin-like beta-sandwich |E set domains |ML domain |Major mite allergen |House-dust mite (Dermatophagoides farinae), Der f 2 [TaxId: 6954]
d1jh5a_ : (PHE53) (GLY108) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Soluble part of TALL-1, sTALL-1 (BAFF) |Human (Homo sapiens) [TaxId: 9606]
d2ep6a1 : (GLY97) (PRO151) [view usage] : b.7.1.1 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |PLC-like (P variant) |Multiple C2 and transmembrane domain-containing protein 2, MCTP2 |Human (Homo sapiens) [TaxId: 9606]
d3wp5a_ : (GLN12) (TYR43) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Neocallimastix patriciarum [TaxId: 4758]
d1uf3a_ : (GLN191) (ARG228) [view usage] : d.159.1.6 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |TT1561-like |Hypothetical protein TT1561 |Thermus thermophilus [TaxId: 274]
d4unwa_ : (SER199) (ASN248) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/eq/newmarket/93/(h3n8)) [TaxId: 159470]
d1uxea_ : (ASP305) (GLU365) [view usage] : b.21.1.1 |Virus attachment protein globular domain |Virus attachment protein globular domain |Adenovirus fiber protein "knob" domain |Adenovirus fiber protein "knob" domain |Human adenovirus 37 [TaxId: 52275]
d2hevf1 : (LEU102) (LEU138) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Tumor necrosis factor ligand superfamily member 4, OX40L |Human (Homo sapiens) [TaxId: 9606]
d1f3ca_ : (HIS55) (GLY89) [view usage] : d.39.1.1 |DLC |DLC |DLC |Dynein light chain 1 (DLC1) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2dkta2 : (GLU83) (PRO111) [view usage] : g.93.1.1 |Zinc hairpin stack |Zinc hairpin stack |Zinc hairpin stack |RING finger and CHY zinc finger domain-containing protein 1 |Mouse (Mus musculus) [TaxId: 10090]
d2ggla1 : (TRP230) (ALA273) [view usage] : d.160.1.2 |Carbon-nitrogen hydrolase |Carbon-nitrogen hydrolase |Carbamilase |N-carbamoyl-D-aminoacid amidohydrolase |Agrobacterium radiobacter [TaxId: 358]
d1kzxa_ : (ASN35) (ALA73) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Intestinal fatty acid binding protein |Human (Homo sapiens) [TaxId: 9606]
d4msva_ : (LYS145) (GLU185) [view usage] : b.22.1.0 |TNF-like |TNF-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1a6qa2 : (LYS7) (ALA63) [view usage] : d.219.1.1 |PP2C-like |PP2C-like |PP2C-like |Protein serine/threonine phosphatase 2C, catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d1a6qa2 : (ARG124) (HIS164) [view usage] : d.219.1.1 |PP2C-like |PP2C-like |PP2C-like |Protein serine/threonine phosphatase 2C, catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d1djib2 : (TRP626) (GLU691) [view usage] : b.7.1.1 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |PLC-like (P variant) |PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2gjua_ : (PRO179) (VAL222) [view usage] : d.159.1.5 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Phosphoesterase-related |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d1ny721 : (LYS71) (ASN130) [view usage] : b.121.4.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Comoviridae-like VP |Comovirus coat proteins (VP37 and VP23) |CPMV (Cowpea mosaic virus) [TaxId: 12264]
d2bgca2 : (LYS47) (VAL87) [view usage] : b.82.3.3 |Double-stranded beta-helix |cAMP-binding domain-like |Listeriolysin regulatory protein PrfA, N-terminal domain |automated matches |Listeria monocytogenes [TaxId: 169963]
d1mzka_ : (SER180) (THR237) [view usage] : b.26.1.2 |SMAD/FHA domain |SMAD/FHA domain |FHA domain |Kinase associated protein phosphatase |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1m3ia_ : (ILE452) (TYR499) [view usage] : f.9.1.1 |Perfringolysin |Perfringolysin |Perfringolysin |Perfringolysin |Clostridium perfringens [TaxId: 1502]
d1z45a1 : (ILE623) (GLY667) [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1hv0a_ : (ALA1) (LYS40) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus circulans [TaxId: 1397]
d1uxbb_ : (ASP305) (GLU365) [view usage] : b.21.1.1 |Virus attachment protein globular domain |Virus attachment protein globular domain |Adenovirus fiber protein "knob" domain |Adenovirus fiber protein "knob" domain |Human adenovirus 37 [TaxId: 52275]
d2b42b_ : (TYR5) (LYS40) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus circulans [TaxId: 1397]
d1knba_ : (SER518) (GLU581) [view usage] : b.21.1.1 |Virus attachment protein globular domain |Virus attachment protein globular domain |Adenovirus fiber protein "knob" domain |Adenovirus fiber protein "knob" domain |Human adenovirus type 5 [TaxId: 28285]
d1auna_ : (GLY2) (TRP36) [view usage] : b.25.1.1 |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |Pathogenesis-related protein 5d |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d2c34a1 : (LYS20) (TYR74) [view usage] : b.1.26.1 |Immunoglobulin-like beta-sandwich |ICP-like |ICP-like |Inhibitor of cysteine peptidases, ICP |Trypanosome (Leishmania mexicana) [TaxId: 5665]
d1djga2 : (TRP626) (GLU691) [view usage] : b.7.1.1 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |PLC-like (P variant) |PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1m3ja_ : (ILE452) (TYR499) [view usage] : f.9.1.1 |Perfringolysin |Perfringolysin |Perfringolysin |Perfringolysin |Clostridium perfringens [TaxId: 1502]
d1hv1a_ : (ALA1) (LYS40) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus circulans [TaxId: 1397]
d1bvva_ : (ALA1) (LYS40) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus circulans [TaxId: 1397]
d1bmv11 : (GLN1005) (GLN1052) [view usage] : b.121.4.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Comoviridae-like VP |Comovirus coat proteins (VP37 and VP23) |BPMV (Bean pod mottle virus) [TaxId: 12260]
d1bmv11 : (SER1089) (ASN1153) [view usage] : b.121.4.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Comoviridae-like VP |Comovirus coat proteins (VP37 and VP23) |BPMV (Bean pod mottle virus) [TaxId: 12260]
d1xnca_ : (ALA1) (LYS40) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus circulans [TaxId: 1397]
d4k6ta_ : (ASP305) (GLU365) [view usage] : b.21.1.1 |Virus attachment protein globular domain |Virus attachment protein globular domain |Adenovirus fiber protein "knob" domain |Adenovirus fiber protein "knob" domain |Human adenovirus 37 [TaxId: 52275]
d1f94a_ : (MET1) (CYS39) [view usage] : g.7.1.1 |Snake toxin-like |Snake toxin-like |Snake venom toxins |Bucandin |Malayan krait (Bungarus candidus) [TaxId: 92438]
d1hn0a4 : (PRO808) (ARG839) [view usage] : b.30.5.2 |Supersandwich |Galactose mutarotase-like |Hyaluronate lyase-like, central domain |Chondroitin ABC lyase I |Proteus vulgaris [TaxId: 585]
d1g1ka_ : (SER52) (THR106) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Cohesin domain |Clostridium thermocellum, cellulosome, various modules [TaxId: 1515]
d2j44a2 : (LYS69) (SER109) [view usage] : b.3.1.3 |Prealbumin-like |Starch-binding domain-like |PUD-like |Pullulanase PulA |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d4bcta_ : (ALA25) (ASN58) [view usage] : b.25.1.1 |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |Osmotin, thaumatin-like protein |automated matches |Actinidia deliciosa [TaxId: 3627]
d1c5ha_ : (ALA1) (LYS40) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus circulans [TaxId: 1397]
d1te5a_ : (SER187) (ALA226) [view usage] : d.153.1.1 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Class II glutamine amidotransferases |Hypothetical protein YafJ (PA1307) |Pseudomonas aeruginosa [TaxId: 287]
d2bvva_ : (ALA1) (LYS40) [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Xylanase II |Bacillus circulans [TaxId: 1397]
d1nnwa_ : (PRO179) (GLU223) [view usage] : d.159.1.5 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Phosphoesterase-related |Hypothetical protein PF1291 |Pyrococcus furiosus [TaxId: 2261]
d1nnwb_ : (PRO179) (GLU223) [view usage] : d.159.1.5 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Phosphoesterase-related |Hypothetical protein PF1291 |Pyrococcus furiosus [TaxId: 2261]
d3c9fa2 : (ARG253) (TYR298) [view usage] : d.159.1.2 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain |5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain |Yeast (Candida albicans) [TaxId: 5476]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.82, b.19, d.159, b.29, b.30, d.153, b.60, b.18, b.121, b.2, d.160, b.1, b.21, b.26, b.22, b.25, d.219, b.7, b.3, d.39,
g.7, f.9, g.93