Tableau information
Concept source: d2bo9b2 amino acid (a.a.) range (THR156)(ASN186)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR156) (MET160) E1
(GLN164) (GLN170) E2
(ASP174) (TYR180) E3
(ILE182) (ASN186) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -64.0° E2
E3 114.7° 153.5° E3
E4 147.7° -139.9° -55.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1b75a_ : (LYS68) (ARG93) [view usage] : b.53.1.1 |Ribosomal protein L25-like |Ribosomal protein L25-like |Ribosomal protein L25-like |Ribosomal protein L25 |Escherichia coli [TaxId: 562]
d1wnha2 : (THR156) (ASP186) [view usage] : d.17.1.5 |Cystatin-like |Cystatin/monellin |Latexin-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1bp1a1 : (GLY49) (LYS95) [view usage] : d.83.1.1 |Aha1/BPI domain-like |Bactericidal permeability-increasing protein, BPI |Bactericidal permeability-increasing protein, BPI |Bactericidal permeability-increasing protein, BPI |Human (Homo sapiens) [TaxId: 9606]
d3pmzf_ : (LEU29) (TRP60) [view usage] : b.96.1.0 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |automated matches |California sea hare (Aplysia californica) [TaxId: 6500]
d2df7l_ : (ARG204) (ASN233) [view usage] : b.121.4.9 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Birnaviridae-like VP |automated matches |Infectious bursal disease virus [TaxId: 10995]
d4stda_ : (THR80) (LYS114) [view usage] : d.17.4.1 |Cystatin-like |NTF2-like |Scytalone dehydratase |Scytalone dehydratase |Fungus (Magnaporthe grisea) [TaxId: 148305]
d1zhta1 : (GLU192) (SER224) [view usage] : d.338.1.1 |Oxysterol-binding protein-like |Oxysterol-binding protein-like |Oxysterol-binding protein |Oxysterol-binding protein homolog 4, KES1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2ch9a_ : (PHE68) (ARG96) [view usage] : d.17.1.0 |Cystatin-like |Cystatin/monellin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2bo9b2 : (THR156) (ASN186) [view usage] : d.17.1.5 |Cystatin-like |Cystatin/monellin |Latexin-like |Latexin |Human (Homo sapiens) [TaxId: 9606]
d2vgba1 : (PRO160) (ASP203) [view usage] : b.58.1.1 |PK beta-barrel domain-like |PK beta-barrel domain-like |Pyruvate kinase beta-barrel domain |Pyruvate kinase (PK) |Human (Homo sapiens) [TaxId: 9606]
d3u5cc_ : (GLY75) (ASP106) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d3b07a_ : (VAL98) (LEU154) [view usage] : f.6.1.1 |Leukocidin-like |Leukocidin-like |Leukocidin (pore-forming toxin) |automated matches |Staphylococcus aureus [TaxId: 158878]
d1nc7d_ : (ARG5) (THR33) [view usage] : b.123.1.1 |Hypothetical protein TM1070 |Hypothetical protein TM1070 |Hypothetical protein TM1070 |Hypothetical protein TM1070 |Thermotoga maritima [TaxId: 2336]
d4q34a_ : (ASP27) (VAL60) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Parabacteroides distasonis [TaxId: 435591]
d1wnha1 : (HIS29) (GLU60) [view usage] : d.17.1.0 |Cystatin-like |Cystatin/monellin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1idpa_ : (THR80) (LYS114) [view usage] : d.17.4.1 |Cystatin-like |NTF2-like |Scytalone dehydratase |Scytalone dehydratase |Fungus (Magnaporthe grisea) [TaxId: 148305]
d1zi7b_ : (GLU192) (SER224) [view usage] : d.338.1.1 |Oxysterol-binding protein-like |Oxysterol-binding protein-like |Oxysterol-binding protein |Oxysterol-binding protein homolog 4, KES1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2xspa_ : (GLN2) (THR43) [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |automated matches |Heterobasidion annosum [TaxId: 13563]
d1zhwa_ : (GLU192) (SER224) [view usage] : d.338.1.1 |Oxysterol-binding protein-like |Oxysterol-binding protein-like |Oxysterol-binding protein |Oxysterol-binding protein homolog 4, KES1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3nx0a_ : (TYR42) (ARG70) [view usage] : d.17.1.2 |Cystatin-like |Cystatin/monellin |Cystatins |Cystatin C |Human (Homo sapiens) [TaxId: 9606]
d2axto1 : (GLU140) (SER176) [view usage] : f.4.1.4 |Transmembrane beta-barrels |OMPA-like |PsbO-like |Manganese-stabilising protein, PsbO |Thermosynechococcus elongatus [TaxId: 146786]
d3uljb_ : (PHE77) (GLY104) [view usage] : b.40.4.0 |OB-fold |Nucleic acid-binding proteins |automated matches |automated matches |Xenopus (Silurana) tropicalis [TaxId: 8364]
d4m4da1 : (GLY74) (LYS120) [view usage] : d.83.1.0 |Aha1/BPI domain-like |Bactericidal permeability-increasing protein, BPI |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2df7a1 : (ARG204) (ASN233) [view usage] : b.121.4.9 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Birnaviridae-like VP |Birnavirus VP2 |Infectious bursal disease virus [TaxId: 10995]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, i.1, b.29, f.4, b.40, b.121, b.96, d.17, b.123, d.338, f.6, d.83, b.58, b.53