Tableau information
Concept source: d3ct6a1 amino acid (a.a.) range (ILE93)(LEU120)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ILE93) (GLY106) H1
(THR108) (LEU116) H2
(LEU116) (LEU120) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 153.4° H2
H3 -158.3° -40.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1yocb_ : (PHE0) (PRO25) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein PA1835 |Pseudomonas aeruginosa [TaxId: 287]
d1mqva_ : (LYS75) (ARG121) [view usage] : a.24.3.2 |Four-helical up-and-down bundle |Cytochromes |Cytochrome c'-like |Cytochrome c' |Rhodopseudomonas palustris [TaxId: 1076]
d1j95a_ : (HIS25) (ARG121) [view usage] : f.14.1.1 |Gated ion channels |Voltage-gated potassium channels |Voltage-gated potassium channels |Potassium channel protein |Streptomyces coelicolor [TaxId: 1902]
d1okca_ : (GLY175) (MET239) [view usage] : f.42.1.1 |Mitochondrial carrier |Mitochondrial carrier |Mitochondrial carrier |ADP,ATP carrier protein |Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
d1is2a2 : (SER479) (ILE546) [view usage] : a.29.3.2 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |acyl-CoA oxidase C-terminal domains |Peroxisomal acyl-CoA oxidase-II, domains 3 and 4 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2ccqa1 : (SER14) (ASN45) [view usage] : d.314.1.1 |PUG domain-like |PUG domain-like |PUG domain |N-glycanase 1, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3lxhb_ : (VAL101) (ASN122) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Novosphingobium aromaticivorans [TaxId: 279238]
d3awja2 : (PRO317) (ALA342) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Huperzia serrata [TaxId: 355589]
d3ct6a1 : (ILE93) (LEU120) [view usage] : c.54.1.2 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |DhaM-like |PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM |Lactococcus lactis [TaxId: 1358]
d1vqrc_ : (LEU19) (ASP49) [view usage] : a.211.1.3 |HD-domain/PDEase-like |HD-domain/PDEase-like |modified HD domain |Hypothetical protein Cj0248 |Campylobacter jejuni [TaxId: 197]
d1y2oa1 : (LEU72) (LYS222) [view usage] : a.238.1.3 |BAR/IMD domain-like |BAR/IMD domain-like |IMD domain |BAP2/IRSp53 N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2hsja1 : (VAL172) (TYR211) [view usage] : c.23.10.3 |Flavodoxin-like |SGNH hydrolase |Acetylhydrolase |Uncharacterized protein SP1450 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2hsjb_ : (VAL172) (LEU210) [view usage] : c.23.10.3 |Flavodoxin-like |SGNH hydrolase |Acetylhydrolase |Uncharacterized protein SP1450 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2qwob_ : (PRO814) (LEU841) [view usage] : a.2.3.1 |Long alpha-hairpin |Chaperone J-domain |Chaperone J-domain |Auxilin J-domain |Cow (Bos taurus) [TaxId: 9913]
d2nvpa1 : (ILE309) (SER331) [view usage] : a.102.1.8 |alpha/alpha toroid |Six-hairpin glycosidases |CPF0428-like |Hypothetical protein CPF0428 |Clostridium perfringens [TaxId: 1502]
d3nl0a_ : (ALA404) (VAL432) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Foot-and-mouth disease virus - type c [TaxId: 12116]
d2d3ma2 : (GLY322) (GLY351) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Aloe arborescens [TaxId: 45385]
d2qwnb_ : (PRO814) (LEU841) [view usage] : a.2.3.1 |Long alpha-hairpin |Chaperone J-domain |Chaperone J-domain |Auxilin J-domain |Cow (Bos taurus) [TaxId: 9913]
d1nz6a_ : (PRO2) (LEU29) [view usage] : a.2.3.1 |Long alpha-hairpin |Chaperone J-domain |Chaperone J-domain |Auxilin J-domain |Cow (Bos taurus) [TaxId: 9913]
d4fzab_ : (LYS245) (ASN277) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nsgb_ : (LEU2022) (ARG2060) [view usage] : a.24.7.1 |Four-helical up-and-down bundle |FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |Human (Homo sapiens) [TaxId: 9606]
d3qt9a_ : (SER4) (THR43) [view usage] : a.102.1.8 |alpha/alpha toroid |Six-hairpin glycosidases |CPF0428-like |Hypothetical protein CPF0428 |Clostridium perfringens [TaxId: 1502]
d1ysya1 : (ASP46) (ARG81) [view usage] : a.8.9.1 |immunoglobulin/albumin-binding domain-like |Coronavirus NSP7-like |Coronavirus NSP7-like |Nonstructural protein 7, NSP7 |SARS coronavirus [TaxId: 227859]
d1hm7b_ : (GLY63) (GLY107) [view usage] : a.128.1.4 |Terpenoid synthases |Terpenoid synthases |Aristolochene/pentalenene synthase |Pentalenene synthase |Streptomyces sp., UC5319 [TaxId: 1931]
d4gaxa1 : (PRO183) (GLN216) [view usage] : a.102.4.0 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |automated matches |automated matches |Artemisia annua [TaxId: 35608]
d1w9ca_ : (GLU754) (ALA783) [view usage] : a.118.1.19 |alpha-alpha superhelix |ARM repeat |Exportin HEAT-like repeat |Exportin-1 (Xpo1, Crm1) |Human (Homo sapiens) [TaxId: 9606]
d4rjza_ : (PRO374) (GLY410) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Agrobacterium fabrum [TaxId: 176299]
d3nkya_ : (SER405) (GLY435) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Foot-and-mouth disease virus - type c [TaxId: 12116]
d1maba1 : (ASP411) (GLY451) [view usage] : a.69.1.1 |Left-handed superhelix |C-terminal domain of alpha and beta subunits of F1 ATP synthase |C-terminal domain of alpha and beta subunits of F1 ATP synthase |F1 ATP synthase alpha subunit, domain 3 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4g8xa_ : (MSE296) (GLY324) [view usage] : a.4.13.2 |DNA/RNA-binding 3-helical bundle |Sigma3 and sigma4 domains of RNA polymerase sigma factors |Sigma4 domain |automated matches |Staphylococcus aureus [TaxId: 93061]
d2a9ha1 : (HIS25) (ARG117) [view usage] : f.14.1.1 |Gated ion channels |Voltage-gated potassium channels |Voltage-gated potassium channels |Potassium channel protein |Streptomyces coelicolor [TaxId: 1902]
d4n15a_ : (LEU103) (ALA132) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Burkholderia ambifaria [TaxId: 339670]
d2ie3a_ : (GLY190) (ASP215) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Human (Homo sapiens) [TaxId: 9606]
d2p0va1 : (GLN54) (THR86) [view usage] : a.102.1.8 |alpha/alpha toroid |Six-hairpin glycosidases |CPF0428-like |Hypothetical protein BT3781 |Bacteroides thetaiotaomicron [TaxId: 818]
d4mqkb_ : (LEU68) (HIS97) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4mqkb_ : (ASN102) (HIS146) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ec0a_ : (SER405) (GLY435) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Foot-and-mouth disease virus [TaxId: 12110]
d1e4oa_ : (HIS224) (GLU249) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Maltodextrin phosphorylase (MALP) |Escherichia coli [TaxId: 562]
d3besl_ : (PHE29) (PHE60) [view usage] : a.26.1.3 |4-helical cytokines |4-helical cytokines |Interferons/interleukin-10 (IL-10) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1i8ba2 : (PRO307) (GLY335) [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Chalcone synthase |Alfalfa (Medicago sativa) [TaxId: 3879]
d1bm8a_ : (LEU80) (PHE102) [view usage] : d.34.1.1 |DNA-binding domain of Mlu1-box binding protein MBP1 |DNA-binding domain of Mlu1-box binding protein MBP1 |DNA-binding domain of Mlu1-box binding protein MBP1 |DNA-binding domain of Mlu1-box binding protein MBP1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1x6ja_ : (LYS6) (HIS30) [view usage] : a.218.1.0 |YgfY-like |YgfY-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1le4a_ : (THR89) (VAL161) [view usage] : a.24.1.1 |Four-helical up-and-down bundle |Apolipoprotein |Apolipoprotein |Apolipoprotein E |Human (Homo sapiens), E4 [TaxId: 9606]
d2dmfa1 : (SER87) (PRO128) [view usage] : d.20.1.3 |UBC-like |UBC-like |RWD domain |E3 ubiquitin-protein ligase RNF25 |Human (Homo sapiens) [TaxId: 9606]
d1djqa1 : (LEU175) (VAL213) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Trimethylamine dehydrogenase, N-terminal domain |Methylophilus methylotrophus, w3a1 [TaxId: 17]
d4n8gc_ : (PRO104) (GLU140) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Chromohalobacter salexigens [TaxId: 290398]
d4pj0a_ : (GLY109) (GLN165) [view usage] : f.26.1.1 |Bacterial photosystem II reaction centre, L and M subunits |Bacterial photosystem II reaction centre, L and M subunits |Bacterial photosystem II reaction centre, L and M subunits |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d3qt3a_ : (SER4) (THR43) [view usage] : a.102.1.8 |alpha/alpha toroid |Six-hairpin glycosidases |CPF0428-like |Hypothetical protein CPF0428 |Clostridium perfringens [TaxId: 1502]
d4ln5a_ : (LEU103) (ALA132) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Burkholderia ambifaria [TaxId: 339670]
d1rvjh1 : (SER209) (ARG248) [view usage] : b.41.1.1 |PRC-barrel domain |PRC-barrel domain |Photosynthetic reaction centre, H-chain, cytoplasmic domain |Photosynthetic reaction centre |Rhodobacter sphaeroides [TaxId: 1063]
d2pf4b_ : (GLY190) (ASP215) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Mouse (Mus musculus) [TaxId: 10090]
d4quwa_ : (GLU194) (VAL231) [view usage] : a.25.1.6 |Ferritin-like |Ferritin-like |PMT1231-like |automated matches |Synechococcus elongatus [TaxId: 1140]
d2vpnb_ : (PRO72) (GLY112) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Halomonas elongata [TaxId: 2746]
d1kx9b_ : (ILE78) (GLY106) [view usage] : a.118.21.1 |alpha-alpha superhelix |Chemosensory protein Csp2 |Chemosensory protein Csp2 |Chemosensory protein Csp2 |Cabbage moth (Mamestra brassicae) [TaxId: 55057]
d1fx8a_ : (PHE145) (THR198) [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Glycerol uptake facilitator protein GlpF |Escherichia coli [TaxId: 562]
d4fjqa1 : (PRO183) (GLN216) [view usage] : a.102.4.0 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |automated matches |automated matches |Artemisia annua [TaxId: 35608]
d1xxhe1 : (ASN209) (HIS238) [view usage] : a.80.1.1 |post-AAA+ oligomerization domain-like |post-AAA+ oligomerization domain-like |DNA polymerase III clamp loader subunits, C-terminal domain |delta prime subunit |Escherichia coli [TaxId: 562]
d1nz6b_ : (ASP101) (LEU129) [view usage] : a.2.3.1 |Long alpha-hairpin |Chaperone J-domain |Chaperone J-domain |Auxilin J-domain |Cow (Bos taurus) [TaxId: 9913]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, c.94, a.104, a.118, a.128, a.102, a.211, c.23, d.144, c.95, c.87, f.26, d.20, a.25, d.38, a.1, a.4, b.41, c.54,
a.29, f.19, a.24, a.26, a.80, a.8, a.69, f.42, a.2, a.218, d.34, a.238, d.314, f.14