Tableau information
Concept source: d1uh2a3 amino acid (a.a.) range (SER292)(ASN345)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER292) (TYR298) H1
(SER326) (ILE332) H2
(VAL339) (ASN345) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -92.4° H2
H3 -98.3° -21.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4pj0c_ : (SER144) (GLY183) [view usage] : f.55.1.1 |Photosystem II antenna protein-like |Photosystem II antenna protein-like |Photosystem II antenna protein-like |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d1zmba1 : (ASN236) (ASN280) [view usage] : c.23.10.7 |Flavodoxin-like |SGNH hydrolase |Putative acetylxylan esterase-like |Acetylxylan esterase related enzyme |Clostridium acetobutylicum [TaxId: 1488]
d1yq9h1 : (GLY400) (GLY439) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |Nickel-iron hydrogenase, large subunit |Desulfovibrio gigas [TaxId: 879]
d1bqnb_ : (PRO247) (PRO272) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d1wy5a1 : (GLU192) (ARG214) [view usage] : c.26.2.5 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |PP-loop ATPase |TilS-like protein Aq_1887 |Aquifex aeolicus [TaxId: 63363]
d4db3a2 : (LYS207) (ASP245) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Vibrio vulnificus [TaxId: 672]
d4hz2a2 : (GLN117) (GLU146) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Xanthobacter autotrophicus [TaxId: 78245]
d1bcca2 : (GLU351) (GLY387) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 1 |Chicken (Gallus gallus) [TaxId: 9031]
d3wu2c_ : (SER144) (GLY183) [view usage] : f.55.1.1 |Photosystem II antenna protein-like |Photosystem II antenna protein-like |Photosystem II antenna protein-like |automated matches |Thermosynechococcus vulcanus [TaxId: 32053]
d3wj1a_ : (PHE280) (ASP303) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Sulfolobus shibatae [TaxId: 2286]
d3gr6a_ : (ASN98) (PRO137) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Staphylococcus aureus [TaxId: 1280]
d1ocja_ : (ASN326) (GLY346) [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |Cellobiohydrolase II (Cel6) |Humicola insolens, Cel6a [TaxId: 34413]
d1kf6c_ : (THR14) (GLY52) [view usage] : f.21.2.2 |Heme-binding four-helical bundle |Fumarate reductase respiratory complex transmembrane subunits |Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD) |Fumarate reductase subunit FrdC |Escherichia coli [TaxId: 562]
d1pvea_ : (LEU6) (ASN25) [view usage] : a.189.1.1 |XPC-binding domain |XPC-binding domain |XPC-binding domain |XPC-binding domain of Rad23 homolog B (Hhr23b) |Human (Homo sapiens) [TaxId: 9606]
d1jx1b_ : (ASN180) (GLY216) [view usage] : d.36.1.1 |Chalcone isomerase |Chalcone isomerase |Chalcone isomerase |Chalcone isomerase |Alfalfa (Medicago sativa) [TaxId: 3879]
d3eyza2 : (SER728) (GLN759) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |DNA polymerase I (Klenow fragment) |Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]
d1tyha_ : (PHE3) (ASP29) [view usage] : a.132.1.3 |Heme oxygenase-like |Heme oxygenase-like |TENA/THI-4 |Transcriptional activator TenA |Bacillus subtilis [TaxId: 1423]
d1kbza_ : (ALA66) (GLY96) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) |Salmonella typhimurium [TaxId: 90371]
d1occa_ : (ASP364) (TRP396) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Mitochondrial cytochrome c oxidase, subunit I |Cow (Bos taurus) [TaxId: 9913]
d1l6ha_ : (GLN32) (ALA57) [view usage] : a.52.1.1 |Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |Plant lipid-transfer and hydrophobic proteins |Non-specific lipid-transfer protein homologue (ns-LTP2) |Rice (Oryza sativa) [TaxId: 4530]
d3cn6a_ : (ASP28) (LEU52) [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Spinach (Spinacia oleracea) [TaxId: 3562]
d1gz1a_ : (ASN326) (GLY346) [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |Cellobiohydrolase II (Cel6) |Humicola insolens, Cel6a [TaxId: 34413]
d2i6ba_ : (PHE201) (VAL217) [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Adenosine kinase |Human (Homo sapiens) [TaxId: 9606]
d1hwwa1 : (HIS470) (THR510) [view usage] : a.8.3.1 |immunoglobulin/albumin-binding domain-like |Families 57/38 glycoside transferase middle domain |alpha-mannosidase, domain 2 |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3u2wa_ : (ASP237) (GLN262) [view usage] : c.68.1.14 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Glycogenin |Glycogenin |Human (Homo sapiens) [TaxId: 9606]
d2o5ra2 : (PRO314) (GLY345) [view usage] : a.97.1.0 |An anticodon-binding domain of class I aminoacyl-tRNA synthetases |An anticodon-binding domain of class I aminoacyl-tRNA synthetases |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d4fs3a_ : (ASN98) (PRO137) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Staphylococcus aureus [TaxId: 282458]
d4nmha_ : (SER170) (LYS205) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |11-beta-hydroxysteroid dehydrogenase 1 |Mouse (Mus musculus) [TaxId: 10090]
d1zmbb_ : (ASN236) (ASN280) [view usage] : c.23.10.7 |Flavodoxin-like |SGNH hydrolase |Putative acetylxylan esterase-like |automated matches |Clostridium acetobutylicum [TaxId: 272562]
d1x9fa_ : (LYS57) (THR87) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Extracellular dodecameric hemoglobin (erythrocruorin), subunit IV (globin A) |Common earthworm (Lumbricus terrestris) [TaxId: 6398]
d1ekjc_ : (ASP192) (LYS211) [view usage] : c.53.2.1 |Resolvase-like |beta-carbonic anhydrase, cab |beta-carbonic anhydrase, cab |beta-carbonic anhydrase |Pea (Pisum sativum) [TaxId: 3888]
d1rrva_ : (SER127) (GLY178) [view usage] : c.87.1.5 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Gtf glycosyltransferase |TDP-vancosaminyltransferase GftD |Amycolatopsis orientalis [TaxId: 31958]
d4p9na_ : (PHE280) (ASP303) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Sulfolobus shibatae [TaxId: 2286]
d1q9sa_ : (SER118) (SER154) [view usage] : b.43.5.1 |Reductase/isomerase/elongation factor common domain |Riboflavin kinase-like |ATP-dependent riboflavin kinase-like |Riboflavin kinase |Human (Homo sapiens) [TaxId: 9606]
d4nmhb_ : (SER170) (LYS205) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |11-beta-hydroxysteroid dehydrogenase 1 |Mouse (Mus musculus) [TaxId: 10090]
d3h6kc_ : (SER170) (SER204) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |11-beta-hydroxysteroid dehydrogenase 1 |Human (Homo sapiens) [TaxId: 9606]
d1htya1 : (HIS470) (THR510) [view usage] : a.8.3.1 |immunoglobulin/albumin-binding domain-like |Families 57/38 glycoside transferase middle domain |alpha-mannosidase, domain 2 |Golgi alpha-mannosidase II |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1ft6a_ : (ASP161) (SER203) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |Cytochrome c554 |Nitrosomonas europaea [TaxId: 915]
d4a05a_ : (ASN352) (GLY372) [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |automated matches |Chaetomium thermophilum [TaxId: 209285]
d1n06a_ : (LEU129) (LYS162) [view usage] : b.43.5.1 |Reductase/isomerase/elongation factor common domain |Riboflavin kinase-like |ATP-dependent riboflavin kinase-like |Riboflavin kinase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d1nb0a_ : (SER118) (LYS155) [view usage] : b.43.5.1 |Reductase/isomerase/elongation factor common domain |Riboflavin kinase-like |ATP-dependent riboflavin kinase-like |Riboflavin kinase |Human (Homo sapiens) [TaxId: 9606]
d2oeqd_ : (GLU66) (MSE116) [view usage] : a.281.1.2 |YheA-like |YheA/YmcA-like |YheA-like |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
d1f8na1 : (SER336) (GLY353) [view usage] : a.119.1.1 |Lipoxigenase |Lipoxigenase |Plant lipoxigenases |Lipoxigenase, C-terminal domain |Soybean (Glycine max), isozyme L1 [TaxId: 3847]
d1zoya2 : (PRO330) (GLY350) [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydogenase |Pig (Sus scrofa) [TaxId: 9823]
d2gsma_ : (GLN403) (PHE438) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Rhodobacter sphaeroides [TaxId: 1063]
d2frvb_ : (GLY400) (GLY439) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |Nickel-iron hydrogenase, large subunit |Desulfovibrio gigas [TaxId: 879]
d3dtuc_ : (GLN403) (TRP439) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Rhodobacter sphaeroides [TaxId: 1063]
d2np5d2 : (ALA113) (GLY142) [view usage] : a.121.1.1 |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Transcriptional regulator RHA1_ro04179 |Rhodococcus sp. [TaxId: 1831]
d1m56a_ : (ASP407) (PHE438) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Rhodobacter sphaeroides [TaxId: 1063]
d2ecpa_ : (LEU515) (ARG552) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Maltodextrin phosphorylase (MALP) |Escherichia coli [TaxId: 562]
d3t7ma_ : (ASP237) (GLN262) [view usage] : c.68.1.14 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Glycogenin |Glycogenin |Human (Homo sapiens) [TaxId: 9606]
d2ahsa_ : (GLN1687) (SER1718) [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1cwua_ : (PRO146) (PHE173) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Oil seed rape (Brassica napus) [TaxId: 3708]
d1hgya_ : (ASN321) (GLY341) [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |Cellobiohydrolase II (Cel6) |Trichoderma reesei, Cel6a [TaxId: 51453]
d1y5ma1 : (SER170) (LYS205) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |11-beta-hydroxysteroid dehydrogenase 1 |Mouse (Mus musculus) [TaxId: 10090]
d1h1lb_ : (CYS10) (GLU31) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, beta chain |Klebsiella pneumoniae [TaxId: 573]
d4kx6c_ : (THR12) (GLY52) [view usage] : f.21.2.2 |Heme-binding four-helical bundle |Fumarate reductase respiratory complex transmembrane subunits |Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD) |Fumarate reductase subunit FrdC |Escherichia coli [TaxId: 536056]
d1c14a_ : (PRO96) (SER121) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Escherichia coli [TaxId: 562]
d4itua_ : (SER143) (ASP173) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Xanthobacter autotrophicus [TaxId: 78245]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, a.119, c.69, c.2, c.6, c.68, c.26, c.92, c.45, e.18, c.72, c.23, d.185, c.55, c.87, a.132, c.53, f.21, f.24,
a.1, d.168, a.138, a.45, b.43, f.19, a.8, a.52, a.281, a.121, a.97, d.36, a.189, f.55