Tableau information
Concept source: d4g6ba_ amino acid (a.a.) range (TYR145)(PHE202)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR145) (ASP150) H1
(ASN153) (ILE180) H2
(SER192) (PHE202) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -138.2° H2
H3 -142.1° -37.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3dpyb1 : (PRO28) (HIS66) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4k6hb_ : (THR138) (GLY171) [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |automated matches |Candida antarctica [TaxId: 34362]
d1enoa_ : (GLY140) (PHE173) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Oil seed rape (Brassica napus) [TaxId: 3708]
d1sk7a_ : (GLN100) (GLU137) [view usage] : a.132.1.2 |Heme oxygenase-like |Heme oxygenase-like |Heme oxygenase HemO (PigA) |Heme oxygenase HemO (PigA) |Pseudomonas aeruginosa [TaxId: 287]
d2p9le_ : (ASN122) (ARG166) [view usage] : a.148.1.1 |Arp2/3 complex 21 kDa subunit ARPC3 |Arp2/3 complex 21 kDa subunit ARPC3 |Arp2/3 complex 21 kDa subunit ARPC3 |automated matches |Cow (Bos taurus) [TaxId: 9913]
d1e9sf_ : (ALA263) (MET294) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Bacterial conjugative coupling protein TrwB |Escherichia coli [TaxId: 562]
d3omic_ : (ILE202) (ARG257) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |automated matches |Rhodobacter sphaeroides [TaxId: 272943]
d1y6kl_ : (GLU50) (ASP84) [view usage] : a.26.1.3 |4-helical cytokines |4-helical cytokines |Interferons/interleukin-10 (IL-10) |Interleukin-10 (cytokine synthesis inhibitory factor, CSIF) |Human (Homo sapiens) [TaxId: 9606]
d1ih5a_ : (PRO77) (THR120) [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Aquaporin-1 |Human (Homo sapiens) [TaxId: 9606]
d3wu2c_ : (GLY38) (HIS74) [view usage] : f.55.1.1 |Photosystem II antenna protein-like |Photosystem II antenna protein-like |Photosystem II antenna protein-like |automated matches |Thermosynechococcus vulcanus [TaxId: 32053]
d3hasa_ : (VAL179) (PHE230) [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |automated matches |Halobacterium salinarum [TaxId: 2242]
d4ki4a2 : (GLY568) (GLY610) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d4lw2c_ : (GLU33) (LEU76) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2q9qd1 : (TYR117) (ASN155) [view usage] : a.278.1.3 |GINS helical bundle-like |GINS helical bundle-like |PSF3 C-terminal domain-like |GINS complex subunit 3, PSF3 |Human (Homo sapiens) [TaxId: 9606]
d1p6gi_ : (GLY70) (GLY101) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |70S ribosome functional complex |Escherichia coli [TaxId: 562]
d2zs7a_ : (PHE254) (GLU283) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1xfha_ : (LEU152) (GLN220) [view usage] : f.49.1.1 |Proton glutamate symport protein |Proton glutamate symport protein |Proton glutamate symport protein |Proton glutamate symport protein |Pyrococcus horikoshii [TaxId: 53953]
d1od2b2 : (ASP2049) (ARG2099) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Acetyl-coenzyme A carboxylase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1d8db_ : (PRO28) (HIS66) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1iapa_ : (PRO115) (GLY164) [view usage] : a.91.1.1 |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |p115RhoGEF |Human (Homo sapiens) [TaxId: 9606]
d3puzg_ : (THR244) (ALA281) [view usage] : f.58.1.1 |MetI-like |MetI-like |MetI-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1e9sb_ : (ALA263) (MET294) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Bacterial conjugative coupling protein TrwB |Escherichia coli [TaxId: 562]
d2cffa_ : (SER53) (PHE72) [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |Phosphoribosylformimino-5-aminoimidazole carboxamide ribotite isomerase HisA |Thermotoga maritima [TaxId: 2336]
d1joga_ : (THR109) (GLN141) [view usage] : a.24.16.2 |Four-helical up-and-down bundle |Nucleotidyltransferase substrate binding subunit/domain |Family 1 bi-partite nucleotidyltransferase subunit |Hypothetical protein HI0074 |Haemophilus influenzae [TaxId: 727]
d2oocb_ : (PHE68) (GLY112) [view usage] : a.24.10.6 |Four-helical up-and-down bundle |Histidine-containing phosphotransfer domain, HPT domain |SphA-like |Histidine phosphotransferase ShpA |Caulobacter crescentus [TaxId: 155892]
d4hpwa_ : (SER269) (HIS309) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
d1t36b2 : (HIS353) (LYS379) [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |Carbamoyl phosphate synthetase, small subunit C-terminal domain |Escherichia coli [TaxId: 562]
d3k1se_ : (HIS54) (ALA104) [view usage] : a.7.2.0 |Spectrin repeat-like |Enzyme IIa from lactose specific PTS, IIa-lac |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1od2a2 : (ASP2049) (ARG2099) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Acetyl-coenzyme A carboxylase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2f1ka1 : (ARG235) (GLU279) [view usage] : a.100.1.12 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |TyrA dimerization domain-like |Prephenate dehydrogenase TyrA |Synechocystis sp. PCC 6803 [TaxId: 1148]
d1u19a_ : (ILE214) (HIS278) [view usage] : f.13.1.2 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Rhodopsin-like |Rhodopsin |Cow (Bos taurus) [TaxId: 9913]
d1ux4a_ : (THR1608) (VAL1638) [view usage] : a.207.1.1 |Formin homology 2 domain (FH2 domain) |Formin homology 2 domain (FH2 domain) |Formin homology 2 domain (FH2 domain) |Bni1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2bdua1 : (THR66) (VAL97) [view usage] : c.108.1.21 |HAD-like |HAD-like |Pyrimidine 5'-nucleotidase (UMPH-1) |Cytosolic 5'-nucleotidase III |Mouse (Mus musculus) [TaxId: 10090]
d1sura_ : (LYS118) (ASN147) [view usage] : c.26.2.2 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |PAPS reductase-like |Phosphoadenylyl sulphate (PAPS) reductase |Escherichia coli [TaxId: 562]
d2hq8a_ : (SER77) (ASP112) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Renilla muelleri [TaxId: 37510]
d1h8fb_ : (PRO311) (ILE376) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Glycogen synthase kinase-3 beta (Gsk3b) |Human (Homo sapiens) [TaxId: 9606]
d1axda1 : (GLN129) (ALA177) [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |Class phi GST |Maize (Zea mays), type I [TaxId: 4577]
d1djba_ : (THR182) (LEU220) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Staphylococcus aureus [TaxId: 1280]
d3ge3a_ : (GLY238) (ASP278) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
d2flob2 : (THR89) (PRO110) [view usage] : c.55.1.8 |Ribonuclease H-like motif |Actin-like ATPase domain |Ppx/GppA phosphatase |Exopolyphosphatase Ppx |Escherichia coli [TaxId: 562]
d3wc9b_ : (PHE157) (GLU191) [view usage] : a.128.1.2 |Terpenoid synthases |Terpenoid synthases |Squalene synthase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3nv6a_ : (PRO275) (ARG298) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Novosphingobium aromaticivorans [TaxId: 279238]
d1yjqa1 : (ILE260) (GLU291) [view usage] : a.100.1.7 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |Ketopantoate reductase PanE |Ketopantoate reductase PanE |Escherichia coli [TaxId: 562]
d3m0ea_ : (ILE283) (ILE303) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |automated matches |Aquifex aeolicus [TaxId: 63363]
d1ec8a2 : (ALA92) (LEU128) [view usage] : d.54.1.1 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |Enolase N-terminal domain-like |D-glucarate dehydratase |Escherichia coli [TaxId: 562]
d4obca_ : (THR389) (THR418) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Hepatitis c virus jfh-1 [TaxId: 356411]
d1fxta_ : (GLU125) (LEU147) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |Ubiquitin conjugating enzyme, UBC |Baker's yeast (Saccharomyces cerevisiae), ubc1 [TaxId: 4932]
d2vjra_ : (THR3) (ASN47) [view usage] : a.1.1.3 |Globin-like |Globin-like |Phycocyanin-like phycobilisome proteins |automated matches |Gloeobacter violaceus [TaxId: 33072]
d1oqla_ : (LEU173) (SER209) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Mistletoe lectin I A-chain |European mistletoe (Viscum album) [TaxId: 3972]
d1w5cd_ : (PHE298) (GLN334) [view usage] : i.5.1.1 |Photosystems |Photosystems |Photosystems |Photosystem II |Thermosynechococcus vulcanus [TaxId: 32053]
d1de5b_ : (ALA366) (ASP404) [view usage] : c.1.15.2 |TIM beta/alpha-barrel |Xylose isomerase-like |L-rhamnose isomerase |L-rhamnose isomerase |Escherichia coli [TaxId: 562]
d4nv0b_ : (SER73) (ASP105) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3eofa_ : (PRO172) (LEU200) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Bacteroides fragilis [TaxId: 272559]
d2fhqa1 : (ASP89) (PRO106) [view usage] : b.45.1.1 |Split barrel-like |FMN-binding split barrel |PNP-oxidase like |Putative general stress protein BT1439 |Bacteroides thetaiotaomicron [TaxId: 818]
d3eofb_ : (PRO172) (LEU200) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Bacteroides fragilis [TaxId: 272559]
d2iazb_ : (ASP62) (LYS112) [view usage] : a.281.1.2 |YheA-like |YheA/YmcA-like |YheA-like |Hypothetical protein SP1372 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d4qyxa_ : (ASP57) (ILE88) [view usage] : c.23.16.2 |Flavodoxin-like |Class I glutamine amidotransferase-like |DJ-1/PfpI |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3d6ya1 : (PRO65) (TYR118) [view usage] : a.6.1.3 |Putative DNA-binding domain |Putative DNA-binding domain |DNA-binding N-terminal domain of transcription activators |automated matches |Bacillus subtilis [TaxId: 1423]
d1kq3a_ : (GLY212) (GLY247) [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |Glycerol dehydrogenase |Thermotoga maritima [TaxId: 2336]
d1eyxa_ : (SER3) (HIS48) [view usage] : a.1.1.3 |Globin-like |Globin-like |Phycocyanin-like phycobilisome proteins |Phycoerythrin alpha subunit |Red algae (Gracilaria chilensis) [TaxId: 2775]
d2zirb_ : (PRO28) (HIS66) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1wtyb_ : (THR85) (LEU115) [view usage] : a.24.16.2 |Four-helical up-and-down bundle |Nucleotidyltransferase substrate binding subunit/domain |Family 1 bi-partite nucleotidyltransferase subunit |Probable nucleotidyltransferase subunit TTHA0048 |Thermus thermophilus [TaxId: 274]
d4hpga_ : (PRO56) (SER83) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Rubber tree (Hevea brasiliensis) [TaxId: 3981]
d1h54a1 : (ASP359) (GLU397) [view usage] : a.102.1.4 |alpha/alpha toroid |Six-hairpin glycosidases |Glycosyltransferase family 36 C-terminal domain |Lactobacillus maltose phosphorylase, central domain |Lactobacillus brevis [TaxId: 1580]
d1mfpa_ : (PRO96) (CYS131) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Escherichia coli [TaxId: 562]
d1omea_ : (THR182) (LEU220) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Staphylococcus aureus [TaxId: 1280]
d4gtob_ : (PRO28) (HIS66) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4hk4a_ : (TYR270) (HIS309) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
d4dr0a_ : (PHE168) (GLN216) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2q98a_ : (GLY152) (HIS195) [view usage] : a.26.1.1 |4-helical cytokines |4-helical cytokines |Long-chain cytokines |Prolactin (placental lactogen) |Human (Homo sapiens) [TaxId: 9606]
d4dxya_ : (PRO274) (ARG297) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Novosphingobium aromaticivorans [TaxId: 279238]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, e.3, c.1, c.67, c.69, a.104, c.2, i.1, c.108, c.26, a.128, a.102, c.14, d.165, e.22, c.23, d.144, c.37, c.55, a.103,
i.5, b.45, a.132, d.20, a.25, f.24, a.1, a.100, d.90, f.13, a.39, a.45, a.91, f.19, d.54, a.24, a.26, a.278, a.7, f.58,
a.6, f.49, a.281, a.207, f.55, a.148