Tableau information
Concept source: d3ehba_ amino acid (a.a.) range (GLY304)(TRP363)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY304) (VAL322) H1
(SER333) (ALA348) H2
(VAL349) (TRP363) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -163.6° H2
H3 -154.5° -14.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1wx5a_ : (THR152) (GLY198) [view usage] : a.86.1.3 |Di-copper centre-containing domain |Di-copper centre-containing domain |Tyrosinase |Tyrosinase |Streptomyces castaneoglobisporus [TaxId: 79261]
d2zwea_ : (THR152) (GLY198) [view usage] : a.86.1.3 |Di-copper centre-containing domain |Di-copper centre-containing domain |Tyrosinase |Tyrosinase |Streptomyces castaneoglobisporus [TaxId: 79261]
d2e9fa_ : (ASP290) (LEU352) [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1g8xa_ : (PHE466) (PHE535) [view usage] : k.1.1.1 |Hybrid and chimeric proteins |Hybrid and chimeric proteins |Hybrid and chimeric proteins |Genetically engineered molecular motor |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d1v54a_ : (GLY269) (HIS328) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Mitochondrial cytochrome c oxidase, subunit I |Cow (Bos taurus) [TaxId: 9913]
d2e22a1 : (LEU152) (PHE184) [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |automated matches |Bacillus sp. [TaxId: 84635]
d4j41f_ : (THR7) (ASN85) [view usage] : a.25.3.0 |Ferritin-like |EsxAB dimer-like |automated matches |automated matches |Bacillus anthracis [TaxId: 260799]
d2z0va_ : (PHE116) (SER225) [view usage] : a.238.1.1 |BAR/IMD domain-like |BAR/IMD domain-like |BAR domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3r7ka1 : (HIS112) (GLY138) [view usage] : e.6.1.0 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
d1t0qb_ : (ASP196) (GLU245) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouE |Pseudomonas stutzeri [TaxId: 316]
d1wtya_ : (SER3) (GLY50) [view usage] : a.24.16.2 |Four-helical up-and-down bundle |Nucleotidyltransferase substrate binding subunit/domain |Family 1 bi-partite nucleotidyltransferase subunit |Probable nucleotidyltransferase subunit TTHA0048 |Thermus thermophilus [TaxId: 274]
d4n4ne_ : (MET469) (GLY527) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |automated matches |Nitrosomonas europaea [TaxId: 915]
d4m32a_ : (THR16) (ASP78) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d1aupa2 : (SER1) (GLY33) [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Clostridium symbiosum [TaxId: 1512]
d1j3ua_ : (PRO43) (GLY84) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |L-aspartate ammonia lyase |Bacillus sp., ym55-1 [TaxId: 1409]
d4puca_ : (SER107) (TYR152) [view usage] : a.118.8.6 |alpha-alpha superhelix |TPR-like |SusD-like |automated matches |Bacteroides uniformis [TaxId: 411479]
d1wx2a_ : (THR152) (GLY198) [view usage] : a.86.1.3 |Di-copper centre-containing domain |Di-copper centre-containing domain |Tyrosinase |Tyrosinase |Streptomyces castaneoglobisporus [TaxId: 79261]
d1yr8a_ : (ASP184) (VAL213) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d1c3da_ : (LYS8) (GLU39) [view usage] : a.102.4.4 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Complement components |Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg |Human (Homo sapiens) [TaxId: 9606]
d2e9fd_ : (ASP290) (LEU352) [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2ei4a_ : (SER169) (LEU235) [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |automated matches |Halobacterium sp. [TaxId: 29285]
d4kk6a_ : (GLY316) (GLY351) [view usage] : f.20.1.1 |Clc chloride channel |Clc chloride channel |Clc chloride channel |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1e0pa_ : (ARG164) (LEU223) [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |Bacteriorhodopsin |Halobacterium salinarum [TaxId: 2242]
d2e9fc_ : (GLY300) (LEU352) [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d3cgha1 : (SER105) (PHE150) [view usage] : a.118.8.6 |alpha-alpha superhelix |TPR-like |SusD-like |Uncharacterized protein BT3984 |Bacteroides thetaiotaomicron [TaxId: 818]
d1uaza_ : (ARG13) (GLY69) [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |Archaerhodopsin-1 |Halobacterium sp. [TaxId: 2243]
d3n1xb_ : (ASP196) (GLU245) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouE |Pseudomonas sp. [TaxId: 320855]
d3d19b1 : (VAL89) (ASN140) [view usage] : a.29.13.1 |Bromodomain-like |Bacillus cereus metalloprotein-like |Bacillus cereus metalloprotein-like |Uncharacterized protein BCE_G9241_1042 |Bacillus cereus [TaxId: 1396]
d3wc9b_ : (ILE270) (CYS303) [view usage] : a.128.1.2 |Terpenoid synthases |Terpenoid synthases |Squalene synthase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3oxuc_ : (ASP3) (GLU39) [view usage] : a.102.4.4 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Complement components |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2fonb3 : (ALA516) (LYS566) [view usage] : a.29.3.0 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |automated matches |automated matches |Solanum lycopersicum [TaxId: 4081]
d3f6ya_ : (THR148) (ALA200) [view usage] : c.23.14.3 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |ADP ribosyl cyclase-like |ADP ribosyl cyclase |Human (Homo sapiens) [TaxId: 9606]
d3eb7a1 : (ALA127) (VAL188) [view usage] : f.1.3.0 |Toxins' membrane translocation domains |delta-Endotoxin (insectocide), N-terminal domain |automated matches |automated matches |Bacillus thuringiensis [TaxId: 1428]
d4fpda_ : (PRO165) (ARG227) [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |automated matches |Halobacterium sp. [TaxId: 64091]
d3awta_ : (THR152) (GLY198) [view usage] : a.86.1.3 |Di-copper centre-containing domain |Di-copper centre-containing domain |Tyrosinase |Tyrosinase |Streptomyces castaneoglobisporus [TaxId: 79261]
d1otwb_ : (THR39) (HIS84) [view usage] : a.132.1.4 |Heme oxygenase-like |Heme oxygenase-like |PqqC-like |Coenzyme PQQ synthesis protein C, PqqC |Klebsiella pneumoniae [TaxId: 573]
d3pvrc_ : (SER1) (GLY61) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Escherichia coli [TaxId: 511145]
d1j2za_ : (SER223) (SER251) [view usage] : b.81.1.1 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |UDP N-acetylglucosamine acyltransferase |UDP N-acetylglucosamine acyltransferase |Helicobacter pylori [TaxId: 210]
d3pfda1 : (PRO97) (GLY126) [view usage] : e.6.1.0 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |automated matches |automated matches |Mycobacterium thermoresistibile [TaxId: 1797]
d3q4ta_ : (LEU275) (GLU305) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2gm8a_ : (ASP43) (GLY93) [view usage] : a.132.1.0 |Heme oxygenase-like |Heme oxygenase-like |automated matches |automated matches |Pyrobaculum aerophilum [TaxId: 178306]
d1pema1 : (TYR16) (SER53) [view usage] : a.98.1.1 |R1 subunit of ribonucleotide reductase, N-terminal domain |R1 subunit of ribonucleotide reductase, N-terminal domain |R1 subunit of ribonucleotide reductase, N-terminal domain |R1 subunit of ribonucleotide reductase, N-terminal domain |Salmonella typhimurium [TaxId: 90371]
d3nmoa_ : (GLY316) (GLY351) [view usage] : f.20.1.1 |Clc chloride channel |Clc chloride channel |Clc chloride channel |automated matches |Escherichia coli [TaxId: 216592]
d3eo8a_ : (PRO112) (GLY156) [view usage] : d.90.1.0 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d1piya_ : (ALA150) (GLU222) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Escherichia coli [TaxId: 562]
d3nkab_ : (PRO187) (LEU227) [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3r7kc1 : (HIS112) (GLY138) [view usage] : e.6.1.0 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
d3sv0a_ : (THR246) (GLY281) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Oryza sativa [TaxId: 39947]
d3axyc_ : (SER2) (LYS31) [view usage] : a.118.7.1 |alpha-alpha superhelix |14-3-3 protein |14-3-3 protein |automated matches |Oryza sativa [TaxId: 39947]
d3bk9b_ : (ASP47) (THR109) [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
d3a2fa2 : (GLY448) (TYR506) [view usage] : e.8.1.0 |DNA/RNA polymerases |DNA/RNA polymerases |automated matches |automated matches |Pyrococcus furiosus [TaxId: 2261]
d2o9ga_ : (PRO187) (LEU227) [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Aquaporin Z |Escherichia coli [TaxId: 562]
d4fasa_ : (MET445) (GLU502) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |automated matches |Nitrosomonas europaea [TaxId: 228410]
d1iu9a_ : (THR148) (GLY186) [view usage] : c.78.2.1 |ATC-like |Aspartate/glutamate racemase |Aspartate/glutamate racemase |Aspartate racemase |Pyrococcus horikoshii OT3 [TaxId: 70601]
d4pucb_ : (SER107) (TYR152) [view usage] : a.118.8.6 |alpha-alpha superhelix |TPR-like |SusD-like |automated matches |Bacteroides uniformis [TaxId: 411479]
d1otsb_ : (GLY316) (GLY351) [view usage] : f.20.1.1 |Clc chloride channel |Clc chloride channel |Clc chloride channel |Clc chloride channel |Escherichia coli [TaxId: 562]
d3bu8a_ : (GLY44) (LEU87) [view usage] : a.146.1.1 |Telomeric repeat binding factor (TRF) dimerisation domain |Telomeric repeat binding factor (TRF) dimerisation domain |Telomeric repeat binding factor (TRF) dimerisation domain |TRF2 |Human (Homo sapiens) [TaxId: 9606]
d2j6ye_ : (ASP2) (GLN41) [view usage] : a.186.1.2 |KaiA/RbsU domain |KaiA/RbsU domain |Phosphoserine phosphatase RsbU, N-terminal domain |automated matches |Bacillus subtilis [TaxId: 1423]
d2zmxa_ : (THR152) (GLY198) [view usage] : a.86.1.3 |Di-copper centre-containing domain |Di-copper centre-containing domain |Tyrosinase |Tyrosinase |Streptomyces castaneoglobisporus [TaxId: 79261]
d1aueb_ : (TRP2024) (ARG2061) [view usage] : a.24.7.1 |Four-helical up-and-down bundle |FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |Human (Homo sapiens) [TaxId: 9606]
d1i0ad_ : (ASP291) (VAL342) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |Argininosuccinate lyase/delta-crystallin |Turkey (Meleagris gallopavo), delta-crystallin [TaxId: 9103]
d4il6d_ : (GLY109) (GLN164) [view usage] : f.26.1.1 |Bacterial photosystem II reaction centre, L and M subunits |Bacterial photosystem II reaction centre, L and M subunits |Bacterial photosystem II reaction centre, L and M subunits |automated matches |Thermosynechococcus vulcanus [TaxId: 32053]
d4n4na_ : (ALA460) (GLY527) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |automated matches |Nitrosomonas europaea [TaxId: 915]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, b.81, a.118, a.128, a.102, a.127, c.23, d.144, f.20, c.37, e.6, a.86, f.26, a.132, c.78, a.266, a.25, f.24, d.90, f.13,
a.138, c.58, a.29, f.1, f.19, a.24, a.146, a.186, a.98, k.1, a.238