Tableau information
Concept source: d2kqya_ amino acid (a.a.) range (ALA14)(SER31)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA14) (ALA20) H1
(ALA20) (ASN25) H2
(ASN25) (SER31) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -117.8° H2
H3 -153.7° 67.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2chna1 : (LYS462) (GLU517) [view usage] : a.246.1.1 |Hyaluronidase domain-like |Hyaluronidase post-catalytic domain-like |Hyaluronidase post-catalytic domain-like |Glucosaminidase GH84 post-catalytic domain |Bacteroides thetaiotaomicron [TaxId: 818]
d1rrma_ : (PRO276) (GLY335) [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |Lactaldehyde reductase FucO |Escherichia coli [TaxId: 562]
d2nsfa1 : (PRO94) (ASP151) [view usage] : a.213.1.4 |DinB/YfiT-like putative metalloenzymes |DinB/YfiT-like putative metalloenzymes |Maleylpyruvate isomerase-like |Micothiol-dependent maleylpyruvate isomerase |Corynebacterium glutamicum [TaxId: 1718]
d1g12a_ : (SER6) (ASN66) [view usage] : d.92.1.12 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Fungal zinc peptidase |Fungal zinc peptidase |Grifola frondosa [TaxId: 5627]
d1h54b1 : (ASN495) (MET541) [view usage] : a.102.1.4 |alpha/alpha toroid |Six-hairpin glycosidases |Glycosyltransferase family 36 C-terminal domain |Lactobacillus maltose phosphorylase, central domain |Lactobacillus brevis [TaxId: 1580]
d1wu6a1 : (LEU200) (CYS234) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Xylanase Y |Bacillus halodurans [TaxId: 86665]
d1vfga1 : (GLY190) (ILE221) [view usage] : a.173.1.1 |Poly A polymerase C-terminal region-like |Poly A polymerase C-terminal region-like |Poly A polymerase C-terminal region-like |Poly A polymerase PcnB |Aquifex aeolicus [TaxId: 63363]
d1j1ba_ : (PRO225) (GLY274) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Glycogen synthase kinase-3 beta (Gsk3b) |Human (Homo sapiens) [TaxId: 9606]
d2mtea_ : (SER16) (LYS60) [view usage] : a.139.1.1 |Type I dockerin domain |Type I dockerin domain |Type I dockerin domain |automated matches |Ruminiclostridium thermocellum [TaxId: 1515]
d3kfaa_ : (LEU323) (ASN358) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1e6va1 : (ALA423) (SER462) [view usage] : a.89.1.1 |Methyl-coenzyme M reductase alpha and beta chain C-terminal domain |Methyl-coenzyme M reductase alpha and beta chain C-terminal domain |Methyl-coenzyme M reductase alpha and beta chain C-terminal domain |Alpha chain |Methanopyrus kandleri [TaxId: 2320]
d2kqya_ : (ALA14) (SER31) [view usage] : a.39.1.4 |EF Hand-like |EF-hand |Parvalbumin |Parvalbumin |Chicken (Gallus gallus) [TaxId: 9031]
d2choa1 : (LYS462) (GLY518) [view usage] : a.246.1.1 |Hyaluronidase domain-like |Hyaluronidase post-catalytic domain-like |Hyaluronidase post-catalytic domain-like |Glucosaminidase GH84 post-catalytic domain |Bacteroides thetaiotaomicron [TaxId: 818]
d1izja3 : (HIS272) (TYR307) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermoactinomyces vulgaris, TVAI [TaxId: 2026]
d3iacc_ : (PRO187) (GLY234) [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
d2vvsa1 : (ASP461) (GLY518) [view usage] : a.246.1.0 |Hyaluronidase domain-like |Hyaluronidase post-catalytic domain-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 226186]
d4fl4g_ : (SER33) (ARG81) [view usage] : a.139.1.0 |Type I dockerin domain |Type I dockerin domain |automated matches |automated matches |Clostridium thermocellum [TaxId: 1515]
d2aowa_ : (ILE226) (GLU268) [view usage] : c.66.1.19 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Histamine methyltransferase |Histamine methyltransferase |Human (Homo sapiens) [TaxId: 9606]
d1ej7l1 : (GLU443) (ASN468) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Tobacco (Nicotiana tabacum), variant turkish samsun [TaxId: 4097]
d1kzga1 : (PHE722) (LYS767) [view usage] : a.87.1.1 |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |Dbl's big sister, Dbs |Mouse (Mus musculus) [TaxId: 10090]
d2av8a_ : (MET224) (ARG292) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Escherichia coli [TaxId: 562]
d2w99b_ : (ALA182) (GLY231) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1u8va1 : (SER397) (ALA449) [view usage] : a.29.3.1 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |Medium chain acyl-CoA dehydrogenase-like, C-terminal domain |4-hydroxybutyryl-CoA dehydratase AbfD, C-terminal domain |Clostridium aminobutyricum [TaxId: 33953]
d4mqrb_ : (PHE162) (VAL181) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1vs5b1 : (TRP103) (GLY154) [view usage] : c.23.15.1 |Flavodoxin-like |Ribosomal protein S2 |Ribosomal protein S2 |Ribosomal protein S2 |Escherichia coli [TaxId: 562]
d2nsga1 : (ASP95) (ASP151) [view usage] : a.213.1.4 |DinB/YfiT-like putative metalloenzymes |DinB/YfiT-like putative metalloenzymes |Maleylpyruvate isomerase-like |Micothiol-dependent maleylpyruvate isomerase |Corynebacterium glutamicum [TaxId: 1718]
d3iaca_ : (PRO187) (GLY234) [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
d2vbna_ : (ILE81) (GLN111) [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
d1khre_ : (ASP169) (ASP198) [view usage] : b.81.1.3 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |Galactoside acetyltransferase-like |Xenobiotic acetyltransferase |Enterococcus faecium, VAT(D) [TaxId: 1352]
d1j5sb_ : (PRO179) (GLU224) [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uronate isomerase TM0064 |Thermotoga maritima [TaxId: 2336]
d1ge6a_ : (SER6) (ASN66) [view usage] : d.92.1.12 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Fungal zinc peptidase |Fungal zinc peptidase |Grifola frondosa [TaxId: 5627]
d1vywc_ : (PRO171) (GLY220) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Cyclin-dependent PK, CDK2 |Human (Homo sapiens) [TaxId: 9606]
d4fl4a_ : (SER33) (ARG81) [view usage] : a.139.1.0 |Type I dockerin domain |Type I dockerin domain |automated matches |automated matches |Clostridium thermocellum [TaxId: 1515]
d4jmua_ : (LEU64) (LYS110) [view usage] : a.61.1.1 |Retroviral matrix proteins |Retroviral matrix proteins |Immunodeficiency virus matrix proteins |automated matches |Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId: 11698]
d1tq6a_ : (LYS346) (ASN413) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Interferon-inducible GTPase |Mouse (Mus musculus) [TaxId: 10090]
d1ohzb_ : (SER11) (LEU56) [view usage] : a.139.1.1 |Type I dockerin domain |Type I dockerin domain |Type I dockerin domain |Endo-1,4-beta-xylanase Y |Clostridium thermocellum [TaxId: 1515]
d2chpb_ : (THR8) (THR63) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1nkda_ : (THR2) (ARG57) [view usage] : a.30.1.1 |ROP-like |ROP protein |ROP protein |ROP protein |Escherichia coli [TaxId: 562]
d2cclb1 : (SER11) (ARG57) [view usage] : a.139.1.1 |Type I dockerin domain |Type I dockerin domain |Type I dockerin domain |Endo-1,4-beta-xylanase Y |Clostridium thermocellum [TaxId: 1515]
d2p85a_ : (LEU395) (SER433) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3chqa1 : (MET462) (LEU494) [view usage] : a.118.1.7 |alpha-alpha superhelix |ARM repeat |Leukotriene A4 hydrolase C-terminal domain |Leukotriene A4 hydrolase C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1ofha_ : (GLU258) (GLY288) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |HslU |Haemophilus influenzae [TaxId: 727]
d2avwb_ : (ASN110) (THR143) [view usage] : d.3.1.12 |Cysteine proteinases |Cysteine proteinases |IgG-specific endopeptidase IdeS (Sib38) |automated matches |Streptococcus pyogenes [TaxId: 293653]
d2o5ka1 : (ALA224) (VAL272) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Glycogen synthase kinase-3 beta (Gsk3b) |Human (Homo sapiens) [TaxId: 9606]
d2ogbb_ : (PRO256) (ASN274) [view usage] : d.345.1.1 |NRDP1 C-terminal domain-like |NRDP1 C-terminal domain-like |USP8 interacting domain |E3 ubiquitin-protein ligase NRDP1 |Human (Homo sapiens) [TaxId: 9606]
d4v19j_ : (PRO127) (VAL148) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, mitochondrial (54S or 39S subunit) |Pig (Sus scrofa) [TaxId: 9823]
d3ul4b_ : (ASP16) (GLY61) [view usage] : a.139.1.0 |Type I dockerin domain |Type I dockerin domain |automated matches |automated matches |Clostridium thermocellum [TaxId: 203119]
d2q91a_ : (LYS31) (GLU52) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |Calcyclin (S100) |Human (Homo sapiens), s100a4 [TaxId: 9606]
d1j5sa_ : (PRO179) (GLY226) [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uronate isomerase TM0064 |Thermotoga maritima [TaxId: 2336]
d2ccld_ : (SER11) (ARG57) [view usage] : a.139.1.1 |Type I dockerin domain |Type I dockerin domain |Type I dockerin domain |automated matches |Clostridium thermocellum [TaxId: 1515]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, b.81, a.104, i.1, a.118, a.102, c.66, d.92, e.22, c.23, d.144, c.37, d.3, a.25, a.39, a.29, d.95, a.87, a.61,
a.89, a.246, a.173, a.30, a.213, a.139, d.345