Tableau information
Concept source: d1ijza_ amino acid (a.a.) range (CYS45)(PHE80)
nSSEs in this Concept: 3
String of secondary struct.elems. (SSEs) defining this concept: HHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(CYS45) (SER55) H1
(CYS57) (PRO72) H2
(SER76) (PHE80) H3
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -151.9° H2
H3 -123.3° 67.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1go3f_ : (THR13) (SER61) [view usage] : a.60.8.2 |SAM domain-like |HRDC-like |RNA polymerase II subunit RBP4 (RpoF) |RNA polymerase II subunit RBP4 (RpoF) |Methanococcus jannaschii [TaxId: 2190]
d1itwa_ : (ASN694) (ALA741) [view usage] : c.77.1.2 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Monomeric isocitrate dehydrogenase |Monomeric isocitrate dehydrogenase |Azotobacter vinelandii [TaxId: 354]
d1civa2 : (ASP342) (LEU381) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Flaveria bidentis, chloroplast [TaxId: 4224]
d1xqga_ : (SER31) (SER81) [view usage] : e.1.1.1 |Serpins |Serpins |Serpins |Maspin |Human (Homo sapiens) [TaxId: 9606]
d1go3n_ : (THR13) (GLY63) [view usage] : a.60.8.2 |SAM domain-like |HRDC-like |RNA polymerase II subunit RBP4 (RpoF) |RNA polymerase II subunit RBP4 (RpoF) |Methanococcus jannaschii [TaxId: 2190]
d3u5cn_ : (GLU86) (ASN151) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d3bk9d_ : (TYR216) (VAL282) [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
d1cpra_ : (THR3) (PRO56) [view usage] : a.24.3.2 |Four-helical up-and-down bundle |Cytochromes |Cytochrome c'-like |Cytochrome c' |Rhodobacter capsulatus [TaxId: 1061]
d2noxl_ : (GLU235) (LEU299) [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Cupriavidus metallidurans [TaxId: 119219]
d3capa_ : (PRO34) (GLY101) [view usage] : f.13.1.2 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Rhodopsin-like |automated matches |Cow (Bos taurus) [TaxId: 9913]
d3bk9e_ : (TRP217) (VAL282) [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
d1g8ma2 : (ARG485) (LEU532) [view usage] : c.97.1.4 |Cytidine deaminase-like |Cytidine deaminase-like |AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC |AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC |Chicken (Gallus gallus) [TaxId: 9031]
d3e08a_ : (TRP217) (VAL282) [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
d3e08e_ : (TRP217) (VAL282) [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
d1eboc_ : (GLN3) (ASP131) [view usage] : h.3.2.1 |Stalk segment of viral fusion proteins |Virus ectodomain |Virus ectodomain |Core structure of Ebo gp2 |Ebola virus [TaxId: 205488]
d1jdea3 : (THR342) (LEU376) [view usage] : d.142.1.5 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |Pyruvate phosphate dikinase, N-terminal domain |Pyruvate phosphate dikinase, N-terminal domain |Clostridium symbiosum [TaxId: 1512]
d2nw8a_ : (TYR216) (VAL284) [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
d1htmd_ : (SER40) (ARG153) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
d2idgb_ : (SER0) (LEU51) [view usage] : a.184.1.1 |TorD-like |TorD-like |TorD-like |Hypothetical protein AF0160 |Archaeoglobus fulgidus [TaxId: 2234]
d4eg1a2 : (ASP691) (PHE743) [view usage] : a.27.1.0 |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |automated matches |automated matches |Trypanosoma brucei [TaxId: 999953]
d1wola_ : (PRO66) (ILE121) [view usage] : a.24.16.0 |Four-helical up-and-down bundle |Nucleotidyltransferase substrate binding subunit/domain |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d2noxa_ : (TRP234) (LEU299) [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Cupriavidus metallidurans [TaxId: 119219]
d1ggoa3 : (THR342) (LEU376) [view usage] : d.142.1.5 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |Pyruvate phosphate dikinase, N-terminal domain |Pyruvate phosphate dikinase, N-terminal domain |Clostridium symbiosum [TaxId: 1512]
d2yjma_ : (GLY-1) (LEU51) [view usage] : a.184.1.1 |TorD-like |TorD-like |TorD-like |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d1iqca1 : (ASN15) (GLY48) [view usage] : a.3.1.5 |Cytochrome c |Cytochrome c |Di-heme cytochrome c peroxidase |Di-heme cytochrome c peroxidase |Nitrosomonas europaea [TaxId: 915]
d4ccga_ : (LEU87) (MET115) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1htmb_ : (THR41) (SER151) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
d2xola_ : (GLY-1) (LEU51) [view usage] : a.184.1.1 |TorD-like |TorD-like |TorD-like |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d2idga1 : (MSE1) (LEU51) [view usage] : a.184.1.1 |TorD-like |TorD-like |TorD-like |Hypothetical protein AF0160 |Archaeoglobus fulgidus [TaxId: 2234]
d2nw9a_ : (TYR216) (VAL284) [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
d1m9na2 : (LYS484) (LEU532) [view usage] : c.97.1.4 |Cytidine deaminase-like |Cytidine deaminase-like |AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC |AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC |Chicken (Gallus gallus) [TaxId: 9031]
d2noxd_ : (TRP234) (LEU299) [view usage] : a.266.1.0 |Indolic compounds 2,3-dioxygenase-like |Indolic compounds 2,3-dioxygenase-like |automated matches |automated matches |Cupriavidus metallidurans [TaxId: 119219]
d2xzmo_ : (PRO87) (GLN153) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d1dika3 : (THR342) (LEU376) [view usage] : d.142.1.5 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |Pyruvate phosphate dikinase, N-terminal domain |Pyruvate phosphate dikinase, N-terminal domain |Clostridium symbiosum [TaxId: 1512]
d2bhra1 : (ALA486) (ASP541) [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |Dengue virus helicase |Dengue virus type 2 [TaxId: 11060]
d3p72a_ : (ILE213) (LEU266) [view usage] : c.10.2.7 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Ngr ectodomain-like |von Willebrand factor binding domain of glycoprotein Ib alpha |Human (Homo sapiens) [TaxId: 9606]
d3ocec_ : (THR195) (SER267) [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
d1qu1c_ : (LEU38) (ARG153) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
d2dika3 : (THR342) (LEU376) [view usage] : d.142.1.5 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |Pyruvate phosphate dikinase, N-terminal domain |Pyruvate phosphate dikinase, N-terminal domain |Clostridium symbiosum [TaxId: 1512]
d1qu1b_ : (LEU38) (ARG153) [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
d1p4ra2 : (LYS483) (GLU529) [view usage] : c.97.1.4 |Cytidine deaminase-like |Cytidine deaminase-like |AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC |AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC |Human (Homo sapiens) [TaxId: 9606]
d2fo0a3 : (GLU485) (LEU529) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Abelsone tyrosine kinase (abl) |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.10, i.1, c.77, a.127, d.144, c.37, c.97, d.20, a.266, d.142, e.1, f.13, d.162, h.3, a.3, a.24, a.26, a.27, a.60, a.184